Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS21255

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
93,102	-		RR42_RS21245	0.82	+1.5
93,102	-		RR42_RS21245	0.82	+0.2
93,102	-		RR42_RS21245	0.82	-2.0
93,102	-		RR42_RS21245	0.82	-0.8
93,137	-		RR42_RS21245	0.86	-1.2
93,138	+		RR42_RS21245	0.86	-2.1
93,138	+		RR42_RS21245	0.86	-1.9
93,138	+		RR42_RS21245	0.86	+0.4
93,139	-		RR42_RS21245	0.86	-0.0
93,139	-		RR42_RS21245	0.86	-2.4
93,139	-		RR42_RS21245	0.86	-2.7
93,249	+				+0.8
93,250	-				-0.9
93,250	-				+0.5
93,250	-				-2.2
93,324	-				+0.6
93,350	+				+0.8
93,396	-				+1.0
93,431	+				+1.3
93,431	+				-0.3
93,431	+				-2.6
93,431	+				-0.5
93,431	+				+2.3
93,432	-				-0.9
93,432	-				-0.4
93,432	-				-2.6
93,891	-				+1.0
93,925	+				-0.2
93,926	+				+0.3
93,969	+				-0.8
93,970	-				-0.1
94,142	+				-2.2
94,142	+				+0.7
94,143	-				-2.3
94,143	-				-0.2
94,143	-				-1.7
94,143	-				+0.7
94,301	+		RR42_RS21255	0.26	+0.2
94,340	+		RR42_RS21255	0.31	-0.7
94,340	+		RR42_RS21255	0.31	+0.7
94,341	-		RR42_RS21255	0.31	-0.1
94,344	-		RR42_RS21255	0.31	+0.6
94,471	+		RR42_RS21255	0.46	-1.7
94,640	+		RR42_RS21255	0.65	+0.3
94,641	-		RR42_RS21255	0.65	+1.5
94,842	+		RR42_RS21255	0.88	+1.3
94,842	+		RR42_RS21255	0.88	-1.9
94,925	+				+0.7
94,962	+				+0.4
95,010	+				-1.0
95,013	+				-2.2
95,013	+				-0.2
95,013	+				-0.7
95,014	-				-1.1
95,027	+				+0.8
95,060	+				-1.2
95,061	-				-0.2
95,061	-				+1.0
95,198	+				+1.9
95,198	+				-0.8
95,199	-				+0.2
95,287	+		RR42_RS21260	0.12	-2.7
95,287	+		RR42_RS21260	0.12	+0.2
95,369	+		RR42_RS21260	0.17	+1.3
95,369	+		RR42_RS21260	0.17	+0.2
95,369	+		RR42_RS21260	0.17	+0.1
95,474	+		RR42_RS21260	0.23	+1.3
95,475	-		RR42_RS21260	0.23	-1.7
95,475	-		RR42_RS21260	0.23	-0.8
95,486	+		RR42_RS21260	0.23	-0.2
95,486	+		RR42_RS21260	0.23	-0.5
95,486	+		RR42_RS21260	0.23	+1.3
95,486	+		RR42_RS21260	0.23	-3.1
95,486	+		RR42_RS21260	0.23	+0.4
95,630	+		RR42_RS21260	0.31	-1.2
95,888	+		RR42_RS21260	0.46	-1.7
95,888	+		RR42_RS21260	0.46	-0.3
95,888	+		RR42_RS21260	0.46	-1.3