Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS21205

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
80,043	+		RR42_RS21200	0.22	-0.3
80,044	-		RR42_RS21200	0.22	+3.3
80,084	-		RR42_RS21200	0.28	+0.3
80,154	+		RR42_RS21200	0.39	+0.7
80,154	+		RR42_RS21200	0.39	+0.1
80,155	-		RR42_RS21200	0.39	-1.9
80,155	-		RR42_RS21200	0.39	-1.0
80,155	-		RR42_RS21200	0.39	+0.3
80,188	-		RR42_RS21200	0.44	+2.0
80,247	+		RR42_RS21200	0.54	+0.5
80,311	-		RR42_RS21200	0.64	+0.1
80,410	-		RR42_RS21200	0.79	+0.3
80,529	+				-0.5
80,530	-				-1.1
80,530	-				+0.9
80,727	-				-1.1
80,742	+				+0.4
81,057	+				+0.7
81,057	+				+0.3
81,057	+				-0.6
81,058	-				-1.6
81,106	-		RR42_RS21205	0.12	-1.1
81,272	-		RR42_RS21205	0.22	-1.7
81,273	+		RR42_RS21205	0.22	-0.3
81,273	+		RR42_RS21205	0.22	-0.7
81,274	-		RR42_RS21205	0.22	-0.7
81,274	-		RR42_RS21205	0.22	+0.2
81,321	+		RR42_RS21205	0.25	-0.2
81,321	+		RR42_RS21205	0.25	-0.5
81,321	+		RR42_RS21205	0.25	-0.4
81,322	-		RR42_RS21205	0.25	+0.6
81,409	+		RR42_RS21205	0.30	-0.6
81,410	-		RR42_RS21205	0.30	+0.6
81,410	-		RR42_RS21205	0.30	+0.7
81,411	+		RR42_RS21205	0.30	-1.1
81,411	+		RR42_RS21205	0.30	-0.1
81,411	+		RR42_RS21205	0.30	-2.2
81,412	-		RR42_RS21205	0.30	-0.1
81,412	-		RR42_RS21205	0.30	-1.9
81,438	+		RR42_RS21205	0.32	+0.1
81,438	+		RR42_RS21205	0.32	-0.0
81,470	+		RR42_RS21205	0.33	-0.1
81,489	+		RR42_RS21205	0.35	-0.7
81,525	+		RR42_RS21205	0.37	-0.9
81,526	-		RR42_RS21205	0.37	-0.3
81,627	+		RR42_RS21205	0.43	-0.8
81,627	+		RR42_RS21205	0.43	-0.3
81,627	+		RR42_RS21205	0.43	+1.1
81,627	+		RR42_RS21205	0.43	-1.7
81,628	-		RR42_RS21205	0.43	+0.2
81,628	-		RR42_RS21205	0.43	+0.3
81,729	+		RR42_RS21205	0.49	-1.3
81,881	+		RR42_RS21205	0.58	-0.9
81,882	-		RR42_RS21205	0.58	+0.6
81,882	-		RR42_RS21205	0.58	-0.6
81,882	-		RR42_RS21205	0.58	+0.0
81,882	-		RR42_RS21205	0.58	+0.0
81,940	+		RR42_RS21205	0.61	+0.8
81,940	+		RR42_RS21205	0.61	-2.7
82,081	-		RR42_RS21205	0.69	-2.0
82,086	+		RR42_RS21205	0.70	+0.1
82,086	+		RR42_RS21205	0.70	-0.4
82,087	-		RR42_RS21205	0.70	-2.2
82,218	+		RR42_RS21205	0.77	-0.3
82,218	+		RR42_RS21205	0.77	-0.7
82,218	+		RR42_RS21205	0.77	-0.4
82,218	+		RR42_RS21205	0.77	+0.9
82,218	+		RR42_RS21205	0.77	+0.8
82,218	+		RR42_RS21205	0.77	-0.9
82,219	-		RR42_RS21205	0.78	+0.3
82,219	-		RR42_RS21205	0.78	-0.1
82,219	-		RR42_RS21205	0.78	-1.3
82,219	-		RR42_RS21205	0.78	-2.3
82,271	+		RR42_RS21205	0.81	+0.8
82,553	-				-1.3
82,553	-				+0.3
82,556	+				+0.1
82,556	+				-0.1
82,556	+				+0.3
82,557	-				+1.3
82,557	-				+0.3
82,557	-				-1.2
82,557	-				+0.4
82,764	+				+1.6
82,764	+				+0.3
82,765	-				+1.3
82,765	-				+1.1
82,772	-				-1.6
82,791	+				-1.1
82,792	-				-0.3
82,797	+				-0.2
82,797	+				+1.3
82,798	-				+0.3
82,798	-				-0.9
83,009	-				-2.8
83,017	+				-0.6
83,017	+				+2.3
83,017	+				+0.5
83,018	-				+0.2
83,018	-				+0.5
83,040	+				+0.9
83,041	-				+0.4
83,041	-				-1.7
83,041	-				+0.3
83,092	+				+0.6
83,093	-				-0.0
83,217	+				+0.4
83,217	+				-0.4
83,218	-				+0.1
83,218	-				+1.3
83,218	-				+0.9
83,218	-				-0.7
83,218	-				-0.6
83,221	+				-0.7
83,221	+				-0.0
83,221	+				-0.3
83,221	+				+0.7
83,222	-				-1.9
83,222	-				+0.8
83,222	-				-0.5
83,222	-				-0.2
83,252	-				+0.4