Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20880

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
7,691	+		RR42_RS20875	0.54	+0.1
7,691	+		RR42_RS20875	0.54	-1.7
7,692	-		RR42_RS20875	0.54	+0.3
7,692	-		RR42_RS20875	0.54	-0.4
7,811	+		RR42_RS20875	0.67	-0.3
7,812	-		RR42_RS20875	0.68	-1.1
7,812	-		RR42_RS20875	0.68	+0.3
7,812	-		RR42_RS20875	0.68	+0.1
7,814	+		RR42_RS20875	0.68	-0.1
7,814	+		RR42_RS20875	0.68	+1.0
7,814	+		RR42_RS20875	0.68	-0.3
7,817	+		RR42_RS20875	0.68	-0.1
7,831	-		RR42_RS20875	0.70	+0.2
7,972	-		RR42_RS20875	0.86	-3.5
8,096	-				-0.3
8,211	+				-0.6
8,211	+				+1.4
8,310	-				-2.8
8,325	-				+0.1
8,325	-				+0.1
8,383	-				-1.0
8,561	+		RR42_RS20880	0.30	+1.0
8,562	-		RR42_RS20880	0.30	-0.1
8,707	+		RR42_RS20880	0.62	-3.1
8,707	+		RR42_RS20880	0.62	-1.2
8,864	-				+0.3
8,900	+				-0.7
8,901	-				+0.1
9,094	+		RR42_RS20885	0.44	-3.7
9,095	-		RR42_RS20885	0.44	-1.5
9,122	-		RR42_RS20885	0.54	-1.7
9,154	-		RR42_RS20885	0.66	-0.3
9,154	-		RR42_RS20885	0.66	-1.1
9,227	-				-1.9
9,286	+				+0.9
9,361	+				-3.3
9,362	-				+1.7
9,362	-				+0.9
9,681	-				+0.2
9,698	-				+0.7