Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20770

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
4,507,842	+		RR42_RS20760	0.32	+0.5
4,507,842	+		RR42_RS20760	0.32	+0.6
4,507,842	+		RR42_RS20760	0.32	-0.2
4,507,842	+		RR42_RS20760	0.32	-1.4
4,507,843	-		RR42_RS20760	0.32	+0.6
4,507,843	-		RR42_RS20760	0.32	-0.3
4,507,843	-		RR42_RS20760	0.32	+0.3
4,507,873	+		RR42_RS20760	0.38	+0.7
4,507,873	+		RR42_RS20760	0.38	-1.5
4,507,874	-		RR42_RS20760	0.38	+0.1
4,507,874	-		RR42_RS20760	0.38	-0.1
4,507,875	+		RR42_RS20760	0.38	+0.4
4,507,875	+		RR42_RS20760	0.38	-0.7
4,507,876	-		RR42_RS20760	0.38	-2.5
4,507,876	-		RR42_RS20760	0.38	-0.1
4,507,914	+		RR42_RS20760	0.46	+0.3
4,507,915	-		RR42_RS20760	0.46	+0.1
4,507,915	-		RR42_RS20760	0.46	-0.2
4,507,915	-		RR42_RS20760	0.46	-1.4
4,507,932	+		RR42_RS20760	0.49	-1.3
4,507,932	+		RR42_RS20760	0.49	+1.5
4,507,933	-		RR42_RS20760	0.49	-1.7
4,507,933	-		RR42_RS20760	0.49	+0.6
4,507,933	-		RR42_RS20760	0.49	-0.1
4,507,933	-		RR42_RS20760	0.49	+1.2
4,508,025	+		RR42_RS20760	0.67	+0.6
4,508,025	+		RR42_RS20760	0.67	+3.5
4,508,026	-		RR42_RS20760	0.67	+0.5
4,508,034	+		RR42_RS20760	0.68	-0.6
4,508,034	+		RR42_RS20760	0.68	-0.9
4,508,142	+		RR42_RS20760	0.89	+1.5
4,508,143	-		RR42_RS20760	0.89	-1.3
4,508,143	-		RR42_RS20760	0.89	-0.5
4,508,172	-				+0.3
4,508,172	-				-0.1
4,508,267	+				+0.6
4,508,267	+				+1.0
4,508,268	-				+1.1
4,508,371	-				-0.2
4,508,891	+		RR42_RS20770	0.34	-0.4
4,508,968	+		RR42_RS20770	0.47	+1.1
4,508,968	+		RR42_RS20770	0.47	-0.6
4,508,968	+		RR42_RS20770	0.47	-0.0
4,508,968	+		RR42_RS20770	0.47	-1.3
4,508,968	+		RR42_RS20770	0.47	-4.0
4,508,968	+		RR42_RS20770	0.47	+0.6
4,508,969	-		RR42_RS20770	0.47	-0.5
4,508,969	-		RR42_RS20770	0.47	-1.1
4,508,969	-		RR42_RS20770	0.47	-1.2
4,508,980	+		RR42_RS20770	0.49	+0.9
4,509,264	-				+0.3
4,509,292	+				+0.4
4,509,298	+				-0.7
4,509,521	+				-1.7
4,509,521	+				+0.5
4,509,521	+				+1.3
4,509,522	-				-3.4
4,509,522	-				+0.6
4,509,954	+		RR42_RS20775	0.89	-0.2
4,509,977	+				+1.0
4,510,031	+				-0.4
4,510,118	+				+2.0
4,510,118	+				+0.8
4,510,118	+				-0.7
4,510,118	+				+1.5
4,510,119	-				+0.5
4,510,119	-				-0.4
4,510,119	-				-1.7
4,510,237	+		RR42_RS20780	0.10	+2.0
4,510,238	-		RR42_RS20780	0.10	-2.3