Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20245

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
4,378,187	-		RR42_RS20240	0.49	-0.5
4,378,360	+		RR42_RS20240	0.59	-0.6
4,378,361	-		RR42_RS20240	0.59	+0.2
4,378,372	+		RR42_RS20240	0.60	-2.7
4,378,373	-		RR42_RS20240	0.60	+0.3
4,378,373	-		RR42_RS20240	0.60	+0.1
4,378,420	+		RR42_RS20240	0.62	-0.1
4,378,612	+		RR42_RS20240	0.73	+0.8
4,378,612	+		RR42_RS20240	0.73	-0.0
4,378,613	-		RR42_RS20240	0.73	+0.4
4,378,684	+		RR42_RS20240	0.77	+0.7
4,378,798	+		RR42_RS20240	0.83	-0.8
4,378,798	+		RR42_RS20240	0.83	-2.5
4,378,799	-		RR42_RS20240	0.84	+0.9
4,378,799	-		RR42_RS20240	0.84	+0.2
4,378,873	+		RR42_RS20240	0.88	+0.1
4,378,873	+		RR42_RS20240	0.88	-1.6
4,378,874	-		RR42_RS20240	0.88	+1.8
4,378,885	+		RR42_RS20240	0.88	+0.5
4,378,885	+		RR42_RS20240	0.88	+0.8
4,378,886	-		RR42_RS20240	0.88	-0.9
4,378,886	-		RR42_RS20240	0.88	-1.2
4,378,976	-				-1.5
4,378,976	-				-1.5
4,378,987	+				+0.6
4,378,987	+				+0.3
4,378,988	-				-0.9
4,378,988	-				-0.7
4,379,046	+				-0.2
4,379,105	+				-0.4
4,379,106	-				+0.6
4,379,213	+		RR42_RS20245	0.10	-2.4
4,379,213	-		RR42_RS20245	0.10	-1.5
4,379,214	-		RR42_RS20245	0.10	-0.4
4,379,261	+		RR42_RS20245	0.15	+1.6
4,379,330	+		RR42_RS20245	0.21	+0.0
4,379,331	-		RR42_RS20245	0.22	-0.1
4,379,331	-		RR42_RS20245	0.22	-0.3
4,379,504	+		RR42_RS20245	0.38	-1.4
4,379,504	+		RR42_RS20245	0.38	+0.9
4,379,504	+		RR42_RS20245	0.38	-0.4
4,379,504	+		RR42_RS20245	0.38	+0.1
4,379,505	-		RR42_RS20245	0.38	-0.1
4,379,530	+		RR42_RS20245	0.40	+2.0
4,379,717	+		RR42_RS20245	0.58	-0.1
4,379,787	+		RR42_RS20245	0.65	-1.4
4,379,787	+		RR42_RS20245	0.65	-0.8
4,379,788	-		RR42_RS20245	0.65	+0.7
4,379,788	-		RR42_RS20245	0.65	-1.1
4,379,788	-		RR42_RS20245	0.65	+0.9
4,379,849	+		RR42_RS20245	0.71	-1.1
4,379,849	+		RR42_RS20245	0.71	+0.0
4,379,850	-		RR42_RS20245	0.71	+3.5
4,379,850	-		RR42_RS20245	0.71	+1.2
4,379,850	-		RR42_RS20245	0.71	+3.4
4,379,927	+		RR42_RS20245	0.78	-1.5
4,379,927	+		RR42_RS20245	0.78	+1.0
4,379,927	+		RR42_RS20245	0.78	+1.5
4,379,927	+		RR42_RS20245	0.78	+1.1
4,380,098	+				+0.6
4,380,098	+				-2.8
4,380,098	+				+0.1
4,380,099	-				-1.0
4,380,099	-				-2.2
4,380,099	-				-0.9
4,380,099	-				+0.5
4,380,167	+				+1.5
4,380,167	+				+0.8
4,380,232	-				-1.1
4,380,243	+				+0.4
4,380,243	+				-0.7
4,380,272	+				+0.7
4,380,272	+				+0.8
4,380,273	-				+0.5
4,380,295	+				-1.0
4,380,320	+				+0.7
4,380,320	+				+0.1
4,380,320	+				+1.2
4,380,320	+				+0.1
4,380,320	+				+1.0
4,380,320	+				+0.7
4,380,320	+				-0.1
4,380,320	+				-1.1
4,380,320	+				+0.8
4,380,320	+				-1.5
4,380,320	+				+1.0
4,380,320	+				-0.1
4,380,321	-				-2.5
4,380,321	-				+0.7
4,380,321	-				+0.3
4,380,321	-				+1.2
4,380,321	-				+1.5
4,380,321	-				+0.2
4,380,321	-				+0.5
4,380,321	-				-0.0
4,380,326	+				-0.7
4,380,327	-				+0.1
4,380,327	-				+1.9
4,380,327	-				-0.2
4,380,327	-				-2.4
4,380,343	-				+0.3
4,380,569	+				+0.4
4,380,569	+				-1.2
4,380,846	-		RR42_RS20250	0.24	+1.5
4,380,857	+		RR42_RS20250	0.25	+0.5
4,380,857	+		RR42_RS20250	0.25	+1.5
4,380,858	-		RR42_RS20250	0.25	-0.1
4,380,858	-		RR42_RS20250	0.25	-0.2
4,380,858	-		RR42_RS20250	0.25	+1.5
4,380,858	-		RR42_RS20250	0.25	+0.4
4,380,998	+		RR42_RS20250	0.37	+0.5
4,380,998	+		RR42_RS20250	0.37	+1.0
4,380,998	+		RR42_RS20250	0.37	+1.1
4,380,999	-		RR42_RS20250	0.37	+0.5