Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19850

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
4,283,936	+		RR42_RS19845	0.37	+0.9
4,284,068	-		RR42_RS19845	0.52	+0.8
4,284,068	-		RR42_RS19845	0.52	+1.8
4,284,068	-		RR42_RS19845	0.52	+1.7
4,284,275	+		RR42_RS19845	0.74	-0.8
4,284,276	-		RR42_RS19845	0.74	-0.1
4,284,276	-		RR42_RS19845	0.74	-1.5
4,284,321	-		RR42_RS19845	0.79	+0.3
4,284,321	-		RR42_RS19845	0.79	-1.7
4,284,330	-		RR42_RS19845	0.80	-0.4
4,284,330	-		RR42_RS19845	0.80	+0.7
4,284,350	-		RR42_RS19845	0.82	-0.1
4,284,507	+				+0.6
4,284,507	+				-0.2
4,284,508	-				+1.1
4,284,508	-				+0.1
4,284,508	-				-1.6
4,284,531	+				+0.7
4,284,531	+				+1.7
4,284,564	-				-0.5
4,284,655	+				+0.3
4,284,677	-				+0.7
4,284,677	-				-0.4
4,284,677	-				-1.5
4,284,781	-				-2.4
4,284,802	+				-0.6
4,284,803	-				-0.1
4,284,803	-				-1.5
4,284,803	-				-1.7
4,284,838	-				-2.3
4,284,838	-				-2.8
4,284,838	-				-1.1
4,284,931	+				-1.6
4,284,931	+				-3.2
4,284,931	+				+1.5
4,284,932	-				-4.3
4,284,932	-				-2.1
4,284,932	-				-4.4
4,284,932	-				-1.1
4,284,932	-				-3.2
4,284,977	+				-2.0
4,284,978	-				-3.0
4,285,058	+		RR42_RS19850	0.10	-0.8
4,285,205	+		RR42_RS19850	0.18	-3.3
4,285,205	+		RR42_RS19850	0.18	-4.1
4,285,205	+		RR42_RS19850	0.18	+0.1
4,285,206	-		RR42_RS19850	0.18	-3.8
4,285,206	-		RR42_RS19850	0.18	-1.9
4,285,206	-		RR42_RS19850	0.18	-4.2
4,285,427	+		RR42_RS19850	0.31	-1.2
4,285,752	-		RR42_RS19850	0.49	-2.9
4,285,752	-		RR42_RS19850	0.49	-1.3
4,286,021	+		RR42_RS19850	0.64	+0.6
4,286,022	-		RR42_RS19850	0.64	-3.2
4,286,043	-		RR42_RS19850	0.66	-2.0
4,286,217	-		RR42_RS19850	0.75	-0.9
4,286,273	+		RR42_RS19850	0.79	-1.7
4,286,345	+		RR42_RS19850	0.83	-0.8
4,286,558	-				-2.0
4,286,651	+				-0.5
4,286,652	-				-1.4
4,286,652	-				+0.0
4,287,051	+		RR42_RS19855	0.35	+1.0
4,287,051	+		RR42_RS19855	0.35	-1.8
4,287,294	+		RR42_RS19855	0.66	-0.8
4,287,303	+		RR42_RS19855	0.67	-0.4
4,287,312	+		RR42_RS19855	0.69	-0.2
4,287,313	-		RR42_RS19855	0.69	-0.1
4,287,313	-		RR42_RS19855	0.69	-1.6
4,287,313	-		RR42_RS19855	0.69	-1.0
4,287,313	-		RR42_RS19855	0.69	+0.4
4,287,496	-				-0.4
4,287,555	+				+0.1
4,287,636	-				-2.3