Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19770

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
4,265,309	+				+0.2
4,265,309	+				-0.3
4,265,310	-				-0.6
4,265,311	+				+1.6
4,265,311	+				-0.8
4,265,312	-				-0.1
4,265,312	-				-0.4
4,265,312	-				-3.8
4,265,315	+				+0.3
4,265,316	-				+1.1
4,265,316	-				-0.1
4,265,322	+				-0.1
4,265,322	+				-0.1
4,265,322	+				+1.0
4,265,322	+				-1.4
4,265,322	+				+0.4
4,265,322	+				-0.8
4,265,322	+				+0.5
4,265,322	+				-1.3
4,265,322	+				+0.3
4,265,322	+				+0.2
4,265,323	-				+1.8
4,265,323	-				-1.4
4,265,323	-				-0.6
4,265,323	-				-1.0
4,265,323	-				+0.2
4,265,323	-				+0.9
4,265,323	-				+0.8
4,265,323	-				+0.3
4,265,323	-				+1.5
4,265,323	-				-2.1
4,265,323	-				+1.4
4,265,324	+				-2.0
4,265,325	-				-0.6
4,265,325	-				+0.5
4,265,325	-				+0.3
4,265,325	-				-2.0
4,265,375	+				-0.1
4,265,375	+				-2.2
4,265,376	-				+0.8
4,265,377	+				-0.4
4,265,377	+				-2.4
4,265,377	+				-0.1
4,265,377	+				+1.0
4,265,377	+				+0.6
4,265,377	+				-0.8
4,265,378	-				-1.4
4,265,378	-				-0.4
4,265,378	-				-0.7
4,265,557	+		RR42_RS19760	0.59	+0.4
4,265,557	+		RR42_RS19760	0.59	-0.4
4,265,557	+		RR42_RS19760	0.59	+0.4
4,265,558	-		RR42_RS19760	0.60	-0.6
4,265,558	-		RR42_RS19760	0.60	-0.1
4,265,558	-		RR42_RS19760	0.60	+0.2
4,265,558	-		RR42_RS19760	0.60	+1.3
4,265,558	-		RR42_RS19760	0.60	-0.5
4,265,558	-		RR42_RS19760	0.60	+0.5
4,265,647	+				-0.8
4,265,648	-				-0.2
4,265,648	-				-0.1
4,265,648	-				+0.4
4,265,699	+				+0.7
4,265,699	+				+0.4
4,265,700	-				+0.2
4,265,700	-				-1.8
4,266,000	+		RR42_RS19765	0.70	-2.5
4,266,001	-		RR42_RS19765	0.71	+0.6
4,266,093	+				+0.1
4,266,093	+				-0.8
4,266,093	+				-0.0
4,266,093	+				-0.5
4,266,093	+				+0.5
4,266,094	-				-0.6
4,266,094	-				+0.8
4,266,100	+				+0.9
4,266,100	+				-0.3
4,266,100	+				-1.5
4,266,101	-				-0.3
4,266,101	-				+0.3
4,266,101	-				-2.5
4,266,159	+				+0.7
4,266,161	+				+0.4
4,266,161	+				+0.2
4,266,161	+				-0.5
4,266,161	+				-0.7
4,266,161	+				+0.2
4,266,161	+				-0.3
4,266,161	+				-0.1
4,266,162	-				+2.0
4,266,162	-				-2.9
4,266,162	-				+0.2
4,266,162	-				+1.4
4,266,162	-				-0.4
4,266,162	-				-2.0
4,266,162	-				-0.0
4,266,162	-				+0.0
4,266,162	-				+0.8
4,266,162	-				+1.5
4,266,400	+		RR42_RS19770	0.21	-0.5
4,266,474	-		RR42_RS19770	0.29	-0.7
4,266,512	+		RR42_RS19770	0.33	+0.0
4,266,512	+		RR42_RS19770	0.33	-0.1
4,266,796	+		RR42_RS19770	0.65	-0.6
4,266,797	-		RR42_RS19770	0.65	-2.1
4,266,797	-		RR42_RS19770	0.65	+0.6
4,266,797	-		RR42_RS19770	0.65	-0.2
4,267,141	+				-1.2
4,267,141	+				-0.8
4,267,142	-				-0.8
4,267,163	+				+0.1
4,267,163	+				-1.0
4,267,164	-				-3.3
4,267,164	-				+0.4
4,267,180	-				-0.6
4,267,180	-				-2.6
4,267,180	-				-0.6
4,267,180	-				-0.4
4,267,184	+				-2.2
4,267,184	+				-0.4
4,267,185	-				+0.3
4,267,247	+				+1.0
4,267,247	+				-3.0
4,267,247	+				-1.1
4,267,248	-				-1.6
4,267,248	-				-2.7
4,267,248	-				-0.1
4,267,287	+				-3.8
4,267,287	+				-0.4
4,267,287	+				-0.6
4,267,288	-				-0.3
4,267,460	+		RR42_RS19775	0.22	-1.1
4,267,460	+		RR42_RS19775	0.22	-0.1
4,267,461	-		RR42_RS19775	0.22	+0.5
4,267,461	-		RR42_RS19775	0.22	-1.7
4,267,601	+		RR42_RS19775	0.44	+1.2
4,267,601	+		RR42_RS19775	0.44	-0.5
4,267,607	+		RR42_RS19775	0.45	-1.1
4,267,625	-		RR42_RS19775	0.48	-1.3
4,267,625	-		RR42_RS19775	0.48	-0.2
4,267,625	-		RR42_RS19775	0.48	+0.9
4,267,664	+		RR42_RS19775	0.54	-0.5
4,267,664	+		RR42_RS19775	0.54	-0.3
4,267,664	+		RR42_RS19775	0.54	+0.1
4,267,665	-		RR42_RS19775	0.54	-1.0
4,267,665	-		RR42_RS19775	0.54	+0.3
4,267,666	+		RR42_RS19775	0.55	+3.2
4,267,666	+		RR42_RS19775	0.55	+1.1
4,267,666	+		RR42_RS19775	0.55	-0.3
4,267,667	-		RR42_RS19775	0.55	-0.9
4,267,765	-		RR42_RS19775	0.70	+0.7
4,267,765	-		RR42_RS19775	0.70	+0.7
4,267,952	+				+0.6
4,267,952	+				+2.0
4,267,952	+				-1.9
4,267,952	+				+0.4
4,267,953	-				+1.1
4,267,953	-				+1.0
4,268,040	+				-2.0
4,268,040	+				+1.9
4,268,040	+				-0.7
4,268,042	+				-0.0
4,268,042	+				-1.4