Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18450

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,994,048	-		RR42_RS18445	0.11	-0.4
3,994,054	+		RR42_RS18445	0.11	-1.3
3,994,055	-		RR42_RS18445	0.11	+0.2
3,994,220	+		RR42_RS18445	0.26	-0.0
3,994,220	+		RR42_RS18445	0.26	+0.0
3,994,220	+		RR42_RS18445	0.26	-0.3
3,994,221	-		RR42_RS18445	0.26	-0.4
3,994,221	-		RR42_RS18445	0.26	+0.1
3,994,221	-		RR42_RS18445	0.26	+0.3
3,994,221	-		RR42_RS18445	0.26	-1.9
3,994,293	+		RR42_RS18445	0.32	+2.3
3,994,293	+		RR42_RS18445	0.32	-0.3
3,994,293	+		RR42_RS18445	0.32	+2.2
3,994,293	+		RR42_RS18445	0.32	-3.6
3,994,294	-		RR42_RS18445	0.33	+0.4
3,994,294	-		RR42_RS18445	0.33	+1.1
3,994,583	+		RR42_RS18445	0.58	-2.5
3,994,632	+		RR42_RS18445	0.63	+0.3
3,994,632	+		RR42_RS18445	0.63	+0.1
3,994,632	+		RR42_RS18445	0.63	+0.9
3,994,632	+		RR42_RS18445	0.63	+0.9
3,994,632	+		RR42_RS18445	0.63	+0.7
3,994,632	+		RR42_RS18445	0.63	-0.9
3,994,632	+		RR42_RS18445	0.63	+0.4
3,994,632	+		RR42_RS18445	0.63	+0.7
3,994,633	-		RR42_RS18445	0.63	+1.3
3,994,633	-		RR42_RS18445	0.63	-0.1
3,994,633	-		RR42_RS18445	0.63	-2.3
3,994,633	-		RR42_RS18445	0.63	-1.3
3,994,633	-		RR42_RS18445	0.63	+1.3
3,994,719	+		RR42_RS18445	0.70	-0.0
3,995,027	+				-0.4
3,995,028	-				+1.9
3,995,028	-				-0.3
3,995,028	-				+0.6
3,995,030	+				+0.4
3,995,030	+				-1.1
3,995,030	+				-2.3
3,995,031	-				+0.7
3,995,031	-				+0.3
3,995,031	-				+0.3
3,995,031	-				-1.6
3,995,294	-		RR42_RS18450	0.23	-2.0
3,995,384	+		RR42_RS18450	0.32	-1.0
3,995,384	+		RR42_RS18450	0.32	-2.0
3,995,385	-		RR42_RS18450	0.32	-0.6
3,995,385	-		RR42_RS18450	0.32	-0.0
3,995,590	+		RR42_RS18450	0.51	-2.5
3,995,590	+		RR42_RS18450	0.51	-0.3
3,995,714	+		RR42_RS18450	0.63	-0.6
3,995,714	+		RR42_RS18450	0.63	-1.0
3,995,715	-		RR42_RS18450	0.63	-0.8
3,995,715	-		RR42_RS18450	0.63	-0.2
3,995,715	-		RR42_RS18450	0.63	+0.2
3,995,715	-		RR42_RS18450	0.63	-1.0
3,996,122	+				-0.5
3,996,122	+				+0.6
3,996,185	+				-2.3
3,996,223	+				-0.8
3,996,223	+				-0.7
3,996,272	-				+1.3
3,996,369	-		RR42_RS18455	0.14	+0.5
3,996,369	-		RR42_RS18455	0.14	-0.6
3,996,369	-		RR42_RS18455	0.14	-0.7
3,996,386	+		RR42_RS18455	0.16	+0.0
3,996,646	+		RR42_RS18455	0.50	-0.4
3,996,646	+		RR42_RS18455	0.50	+0.0
3,996,646	+		RR42_RS18455	0.50	+0.9
3,996,678	-		RR42_RS18455	0.54	-1.0
3,996,884	+		RR42_RS18455	0.81	-0.7
3,996,885	-		RR42_RS18455	0.81	+2.4
3,996,885	-		RR42_RS18455	0.81	+0.3
3,996,983	+				+0.0
3,996,984	-				+1.9
3,997,055	+				-0.3
3,997,056	-				+0.2