Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17515

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,789,442	-		RR42_RS17510	0.17	+1.3
3,789,442	-		RR42_RS17510	0.17	+0.2
3,789,561	+		RR42_RS17510	0.28	-0.8
3,789,561	+		RR42_RS17510	0.28	-1.0
3,789,735	+		RR42_RS17510	0.45	-0.6
3,789,758	+		RR42_RS17510	0.47	-0.6
3,789,758	+		RR42_RS17510	0.47	-1.3
3,789,759	-		RR42_RS17510	0.47	-1.1
3,789,759	-		RR42_RS17510	0.47	-0.3
3,789,759	-		RR42_RS17510	0.47	-0.7
3,789,804	+		RR42_RS17510	0.51	+1.3
3,789,928	-		RR42_RS17510	0.63	-0.8
3,789,928	-		RR42_RS17510	0.63	+0.3
3,789,930	+		RR42_RS17510	0.63	-0.7
3,789,930	+		RR42_RS17510	0.63	-0.3
3,789,930	+		RR42_RS17510	0.63	-1.1
3,789,930	+		RR42_RS17510	0.63	-0.7
3,789,930	+		RR42_RS17510	0.63	-1.5
3,789,930	+		RR42_RS17510	0.63	+1.6
3,789,931	-		RR42_RS17510	0.63	-0.8
3,789,931	-		RR42_RS17510	0.63	-1.1
3,789,936	+		RR42_RS17510	0.64	-1.0
3,790,045	-		RR42_RS17510	0.74	-0.8
3,790,122	+		RR42_RS17510	0.82	-1.8
3,790,122	+		RR42_RS17510	0.82	+0.6
3,790,123	-		RR42_RS17510	0.82	+0.3
3,790,152	+		RR42_RS17510	0.85	-2.8
3,790,153	-		RR42_RS17510	0.85	-0.0
3,790,153	-		RR42_RS17510	0.85	+0.7
3,790,153	-		RR42_RS17510	0.85	-0.9
3,790,153	-		RR42_RS17510	0.85	-1.5
3,790,191	+		RR42_RS17510	0.88	-0.0
3,790,192	-		RR42_RS17510	0.88	-2.0
3,790,225	+				-0.9
3,790,225	+				-1.3
3,790,226	-				-1.5
3,790,226	-				-3.4
3,790,226	-				-2.0
3,790,226	-				-2.8
3,790,442	+				-0.1
3,790,442	+				+0.4
3,790,443	-				-0.1
3,790,656	-		RR42_RS17515	0.23	+0.2
3,790,656	-		RR42_RS17515	0.23	+1.3
3,790,797	+		RR42_RS17515	0.35	+0.2
3,790,798	-		RR42_RS17515	0.35	-0.2
3,791,009	-		RR42_RS17515	0.51	+0.9
3,791,010	-		RR42_RS17515	0.51	+0.6
3,791,181	-		RR42_RS17515	0.65	+1.2
3,791,266	-		RR42_RS17515	0.71	+0.9
3,791,381	+		RR42_RS17515	0.80	-0.7
3,791,381	+		RR42_RS17515	0.80	+0.5
3,791,381	+		RR42_RS17515	0.80	-0.4
3,791,381	+		RR42_RS17515	0.80	+0.6
3,791,381	+		RR42_RS17515	0.80	+0.1
3,791,381	+		RR42_RS17515	0.80	+0.6
3,791,382	-		RR42_RS17515	0.80	+1.7
3,791,382	-		RR42_RS17515	0.80	-2.0
3,791,382	-		RR42_RS17515	0.80	-0.7
3,791,382	-		RR42_RS17515	0.80	+1.4
3,791,382	-		RR42_RS17515	0.80	+0.3
3,791,382	-		RR42_RS17515	0.80	+1.0
3,791,382	-		RR42_RS17515	0.80	-0.4
3,791,382	-		RR42_RS17515	0.80	-0.2
3,791,382	-		RR42_RS17515	0.80	+1.9
3,791,466	-		RR42_RS17515	0.87	+0.3
3,791,466	-		RR42_RS17515	0.87	+1.6
3,791,466	-		RR42_RS17515	0.87	-1.9
3,791,697	-				+1.4
3,791,780	+		RR42_RS17520	0.11	-1.5
3,791,780	+		RR42_RS17520	0.11	+0.1
3,791,781	-		RR42_RS17520	0.11	+0.9
3,791,786	+		RR42_RS17520	0.12	-0.3
3,791,786	+		RR42_RS17520	0.12	+0.1
3,791,786	+		RR42_RS17520	0.12	+0.6
3,791,787	-		RR42_RS17520	0.12	-1.4
3,791,829	+		RR42_RS17520	0.19	-0.4
3,791,838	+		RR42_RS17520	0.21	+1.4
3,791,839	-		RR42_RS17520	0.21	+0.8
3,791,839	-		RR42_RS17520	0.21	-0.8
3,791,839	-		RR42_RS17520	0.21	+0.4
3,791,839	-		RR42_RS17520	0.21	-1.3
3,792,131	+		RR42_RS17520	0.69	+0.9
3,792,269	+				-0.4
3,792,269	+				+0.3
3,792,296	+				-1.5
3,792,296	+				-1.0
3,792,296	+				-0.7
3,792,296	+				-0.7
3,792,296	+				-0.7
3,792,297	-				-0.9
3,792,297	-				-0.9
3,792,297	-				+1.3
3,792,297	-				+0.2
3,792,297	-				+0.5
3,792,297	-				-1.3
3,792,299	+				-1.0
3,792,299	+				+0.1
3,792,299	+				-0.6
3,792,300	-				-2.4
3,792,391	+				-1.4
3,792,391	+				+0.5
3,792,392	-				+0.6