Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17385

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,760,646	+		RR42_RS17380	0.61	-3.2
3,760,646	+		RR42_RS17380	0.61	+0.8
3,760,678	+		RR42_RS17380	0.63	-2.6
3,760,678	+		RR42_RS17380	0.63	-0.2
3,760,678	+		RR42_RS17380	0.63	-3.0
3,760,678	+		RR42_RS17380	0.63	-1.5
3,760,863	-		RR42_RS17380	0.76	-2.1
3,760,863	-		RR42_RS17380	0.76	-0.7
3,760,963	+		RR42_RS17380	0.83	-1.0
3,760,964	-		RR42_RS17380	0.83	-2.9
3,761,293	+				+0.3
3,761,293	+				-2.7
3,761,294	-				+1.9
3,761,294	-				+0.1
3,761,294	-				-0.7
3,761,294	-				+0.8
3,761,306	-				+0.4
3,761,306	-				-0.8
3,761,306	-				-0.4
3,761,499	+				-1.0
3,761,499	+				-2.8
3,761,789	+		RR42_RS17385	0.17	-3.6
3,761,789	+		RR42_RS17385	0.17	-3.2
3,761,789	+		RR42_RS17385	0.17	-4.2
3,761,790	-		RR42_RS17385	0.17	-3.4
3,761,790	-		RR42_RS17385	0.17	-2.9
3,761,874	+		RR42_RS17385	0.26	-3.8
3,761,874	+		RR42_RS17385	0.26	-3.7
3,761,874	+		RR42_RS17385	0.26	-2.4
3,761,874	+		RR42_RS17385	0.26	-2.9
3,761,875	-		RR42_RS17385	0.26	-1.9
3,761,948	-		RR42_RS17385	0.34	-1.9
3,762,098	+		RR42_RS17385	0.49	-2.0
3,762,099	-		RR42_RS17385	0.50	-2.4
3,762,197	+		RR42_RS17385	0.60	-0.7
3,762,197	+		RR42_RS17385	0.60	-3.0
3,762,197	+		RR42_RS17385	0.60	-4.1
3,762,197	+		RR42_RS17385	0.60	-0.5
3,762,198	-		RR42_RS17385	0.60	-3.3
3,762,198	-		RR42_RS17385	0.60	-0.7
3,762,269	+		RR42_RS17385	0.67	-1.5
3,762,270	-		RR42_RS17385	0.68	-0.7
3,762,284	+		RR42_RS17385	0.69	-1.6
3,762,284	+		RR42_RS17385	0.69	-3.1
3,762,284	+		RR42_RS17385	0.69	-4.0
3,762,285	-		RR42_RS17385	0.69	+0.1
3,762,557	+				-1.9
3,762,557	+				+0.9
3,762,557	+				-3.0
3,762,557	+				-3.6
3,762,558	-				-4.1
3,762,558	-				-3.7
3,762,558	-				-2.6
3,762,558	-				-2.0
3,762,558	-				-1.4
3,762,558	-				-3.6
3,762,558	-				-2.6
3,762,558	-				-3.1
3,762,663	+				+1.0
3,762,715	+				-0.2
3,762,716	-				+0.8
3,762,805	+				+0.9
3,762,991	+		RR42_RS17390	0.13	-3.3
3,762,991	+		RR42_RS17390	0.13	-1.9
3,762,992	-		RR42_RS17390	0.13	-1.9
3,763,325	-		RR42_RS17390	0.28	-1.6
3,763,462	+		RR42_RS17390	0.35	-5.1
3,763,463	-		RR42_RS17390	0.35	-3.0
3,763,465	+		RR42_RS17390	0.35	-2.4
3,763,466	-		RR42_RS17390	0.35	-4.6
3,763,466	-		RR42_RS17390	0.35	-2.7