Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17295

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,744,458	+		RR42_RS17290	0.24	+0.9
3,744,459	-		RR42_RS17290	0.24	-0.2
3,744,515	+		RR42_RS17290	0.30	+1.0
3,744,516	-		RR42_RS17290	0.30	-0.5
3,744,516	-		RR42_RS17290	0.30	-0.8
3,744,770	+		RR42_RS17290	0.59	+0.2
3,744,771	-		RR42_RS17290	0.59	-0.2
3,744,771	-		RR42_RS17290	0.59	-0.8
3,744,771	-		RR42_RS17290	0.59	-0.1
3,744,771	-		RR42_RS17290	0.59	-1.9
3,744,879	+		RR42_RS17290	0.71	-0.6
3,745,053	-				-0.7
3,745,055	+				+0.6
3,745,055	+				+1.8
3,745,055	+				-1.6
3,745,055	+				-1.8
3,745,055	+				+0.0
3,745,056	-				-1.1
3,745,056	-				+1.0
3,745,056	-				-2.6
3,745,056	-				-0.8
3,745,056	-				-0.8
3,745,056	-				-0.1
3,745,056	-				+0.3
3,745,056	-				-0.1
3,745,056	-				+1.6
3,745,100	+				-0.0
3,745,134	-				-1.5
3,745,134	-				-0.3
3,745,403	+		RR42_RS17295	0.42	-1.8
3,745,443	+		RR42_RS17295	0.50	-0.8
3,745,456	+		RR42_RS17295	0.52	+0.3
3,745,456	+		RR42_RS17295	0.52	-0.3
3,745,456	+		RR42_RS17295	0.52	-0.8
3,745,456	+		RR42_RS17295	0.52	+2.5
3,745,456	+		RR42_RS17295	0.52	+0.5
3,745,456	+		RR42_RS17295	0.52	+1.2
3,745,456	+		RR42_RS17295	0.52	-0.7
3,745,456	+		RR42_RS17295	0.52	-0.3
3,745,457	-		RR42_RS17295	0.52	-0.3
3,745,457	-		RR42_RS17295	0.52	-0.9
3,745,457	-		RR42_RS17295	0.52	-1.4
3,745,457	-		RR42_RS17295	0.52	-0.3
3,745,457	-		RR42_RS17295	0.52	-0.3
3,745,457	-		RR42_RS17295	0.52	-1.0
3,745,457	-		RR42_RS17295	0.52	+0.1
3,745,594	+		RR42_RS17295	0.78	+0.3
3,745,595	-		RR42_RS17295	0.79	-0.1
3,745,642	+		RR42_RS17295	0.88	-0.4
3,745,642	+		RR42_RS17295	0.88	-0.3
3,745,643	-		RR42_RS17295	0.88	-0.3
3,745,643	-		RR42_RS17295	0.88	+0.9
3,745,643	-		RR42_RS17295	0.88	-0.1
3,745,658	-				-1.6
3,745,705	+				-0.1
3,745,705	+				-1.5
3,745,705	+				-0.3
3,745,706	-				+1.2
3,745,742	+				-2.0
3,745,894	+				-0.6
3,745,894	+				-0.3
3,745,894	+				+0.5
3,745,894	+				-0.3
3,745,894	+				-0.3
3,745,895	-				+0.5
3,745,948	-				-0.2
3,746,085	-				-0.5
3,746,372	+		RR42_RS17300	0.28	-0.1
3,746,372	+		RR42_RS17300	0.28	-0.2
3,746,373	-		RR42_RS17300	0.28	-0.2
3,746,373	-		RR42_RS17300	0.28	-0.3
3,746,381	+		RR42_RS17300	0.28	-0.6
3,746,381	+		RR42_RS17300	0.28	-1.1
3,746,384	+		RR42_RS17300	0.28	+0.4
3,746,384	+		RR42_RS17300	0.28	-0.8
3,746,385	-		RR42_RS17300	0.28	+4.6
3,746,469	-		RR42_RS17300	0.34	+0.5
3,746,469	-		RR42_RS17300	0.34	-1.1