Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15400

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,328,638	-		RR42_RS15395	0.11	+0.7
3,328,742	+		RR42_RS15395	0.24	-0.2
3,328,742	+		RR42_RS15395	0.24	+0.6
3,328,871	+		RR42_RS15395	0.39	+1.2
3,328,871	+		RR42_RS15395	0.39	+1.2
3,328,964	+		RR42_RS15395	0.51	+1.3
3,328,964	+		RR42_RS15395	0.51	+0.5
3,328,964	+		RR42_RS15395	0.51	+0.3
3,329,013	-		RR42_RS15395	0.57	+1.2
3,329,082	-		RR42_RS15395	0.65	-0.9
3,329,082	-		RR42_RS15395	0.65	+2.5
3,329,082	-		RR42_RS15395	0.65	-2.5
3,329,082	-		RR42_RS15395	0.65	-1.6
3,329,086	+		RR42_RS15395	0.66	+2.5
3,329,087	-		RR42_RS15395	0.66	-0.0
3,329,114	+		RR42_RS15395	0.69	-0.6
3,329,114	+		RR42_RS15395	0.69	-2.2
3,329,114	+		RR42_RS15395	0.69	-1.2
3,329,115	-		RR42_RS15395	0.69	+2.7
3,329,128	-		RR42_RS15395	0.71	-1.6
3,329,402	+				+1.2
3,329,403	-				+0.0
3,329,429	-				+0.2
3,329,502	-				-0.4
3,329,577	+				+1.2
3,329,577	+				+0.2
3,329,577	+				+0.3
3,329,577	+				-1.3
3,329,577	+				+0.4
3,329,578	-				+0.6
3,329,578	-				-1.9
3,329,578	-				-1.2
3,329,578	-				-1.1
3,329,578	-				+0.6
3,329,676	+				-0.2
3,329,676	+				-0.5
3,329,677	-				+0.8
3,329,677	-				+0.1
3,329,677	-				+0.0
3,329,817	+		RR42_RS15400	0.20	-0.1
3,329,817	+		RR42_RS15400	0.20	-3.0
3,329,817	+		RR42_RS15400	0.20	-1.7
3,329,817	+		RR42_RS15400	0.20	-0.0
3,329,818	-		RR42_RS15400	0.20	-0.5
3,329,827	-		RR42_RS15400	0.21	+0.2
3,329,949	+		RR42_RS15400	0.31	+0.7
3,329,950	-		RR42_RS15400	0.31	-0.8
3,329,950	-		RR42_RS15400	0.31	+0.2
3,330,064	-		RR42_RS15400	0.41	-1.2
3,330,702	+				-2.8
3,330,702	+				-1.0
3,330,702	+				-2.9
3,330,702	+				-1.4
3,330,702	+				-2.4
3,330,702	+				-1.5
3,330,703	-				-1.1
3,330,703	-				-1.1
3,330,703	-				-1.5
3,330,703	-				-2.0
3,330,772	-				+1.0
3,330,772	-				-0.5
3,330,882	+				+0.6
3,330,883	-				+0.9
3,330,883	-				-2.5
3,330,934	+				-0.1
3,330,934	+				-1.1
3,330,934	+				+1.0
3,330,934	+				+0.3
3,330,935	-				-2.8
3,330,935	-				+0.3
3,330,935	-				+0.0
3,330,935	-				+0.3
3,330,982	+				-2.4
3,330,982	+				-0.5
3,330,982	+				+1.2
3,331,005	+		RR42_RS15405	0.11	-1.8
3,331,006	-		RR42_RS15405	0.11	+0.7
3,331,006	-		RR42_RS15405	0.11	+0.1
3,331,006	-		RR42_RS15405	0.11	-0.8
3,331,082	+		RR42_RS15405	0.23	+0.5
3,331,082	+		RR42_RS15405	0.23	+2.2
3,331,083	-		RR42_RS15405	0.23	-1.2
3,331,177	+		RR42_RS15405	0.38	-1.2
3,331,249	+		RR42_RS15405	0.49	-0.5
3,331,250	-		RR42_RS15405	0.50	-3.6
3,331,250	-		RR42_RS15405	0.50	-1.5
3,331,250	-		RR42_RS15405	0.50	-1.5
3,331,323	-		RR42_RS15405	0.61	+1.3
3,331,563	+				+0.1
3,331,563	+				+1.1
3,331,564	-				-0.1
3,331,564	-				+0.1
3,331,596	-				-0.2
3,331,596	-				-0.6
3,331,611	+				+0.6
3,331,612	-				-2.7
3,331,640	+				+0.2
3,331,642	+				-1.4
3,331,651	+				-0.5
3,331,669	+				+0.1
3,331,669	+				-1.1
3,331,672	+				+0.6
3,331,760	+				-0.1
3,331,765	+				-3.0
3,331,766	-				-0.5
3,331,768	+				-2.9
3,331,768	+				-1.8