Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15275

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,303,795	-				+1.7
3,303,883	-		RR42_RS15270	0.11	+0.6
3,303,977	+		RR42_RS15270	0.24	-0.5
3,304,008	+		RR42_RS15270	0.29	+0.6
3,304,008	+		RR42_RS15270	0.29	-0.3
3,304,008	+		RR42_RS15270	0.29	-1.3
3,304,009	-		RR42_RS15270	0.29	+1.6
3,304,058	+		RR42_RS15270	0.36	+0.4
3,304,058	+		RR42_RS15270	0.36	+1.2
3,304,058	+		RR42_RS15270	0.36	-0.6
3,304,058	+		RR42_RS15270	0.36	+0.7
3,304,058	+		RR42_RS15270	0.36	+0.1
3,304,059	-		RR42_RS15270	0.36	-1.1
3,304,059	-		RR42_RS15270	0.36	-0.2
3,304,059	-		RR42_RS15270	0.36	+1.8
3,304,059	-		RR42_RS15270	0.36	-0.7
3,304,221	-		RR42_RS15270	0.59	+0.4
3,304,221	-		RR42_RS15270	0.59	-0.5
3,304,307	+		RR42_RS15270	0.71	+1.1
3,304,307	+		RR42_RS15270	0.71	-0.3
3,304,308	-		RR42_RS15270	0.71	-0.4
3,304,367	+		RR42_RS15270	0.80	+2.2
3,304,368	-		RR42_RS15270	0.80	-0.4
3,304,385	+		RR42_RS15270	0.82	-0.6
3,304,727	+				-2.4
3,304,866	+		RR42_RS15275	0.21	+0.2
3,304,866	+		RR42_RS15275	0.21	-1.2
3,304,878	-		RR42_RS15275	0.23	-1.1
3,305,034	+		RR42_RS15275	0.49	-0.3
3,305,035	-		RR42_RS15275	0.50	-0.4
3,305,123	+		RR42_RS15275	0.65	-3.8
3,305,286	+				-0.8
3,305,287	-				-0.3
3,305,287	-				-0.0
3,305,287	-				+0.5
3,305,506	+				+1.7
3,305,507	-				-0.7
3,305,507	-				+0.3
3,305,507	-				+0.4
3,305,512	+				-0.1
3,305,512	+				+1.0
3,305,512	+				+1.2
3,305,513	-				-1.1
3,305,668	+		RR42_RS15280	0.16	-0.4
3,305,669	-		RR42_RS15280	0.16	+1.9
3,305,669	-		RR42_RS15280	0.16	+0.2
3,305,669	-		RR42_RS15280	0.16	-2.3
3,305,749	+		RR42_RS15280	0.21	+0.4
3,305,749	+		RR42_RS15280	0.21	+0.4
3,305,749	+		RR42_RS15280	0.21	+0.2
3,305,749	+		RR42_RS15280	0.21	-1.8
3,305,750	-		RR42_RS15280	0.21	-1.6
3,305,750	-		RR42_RS15280	0.21	-0.8
3,305,794	+		RR42_RS15280	0.24	-1.0
3,305,794	+		RR42_RS15280	0.24	-0.1
3,305,948	+		RR42_RS15280	0.33	-0.5
3,305,949	-		RR42_RS15280	0.33	-0.9
3,306,035	-		RR42_RS15280	0.38	+3.7
3,306,035	-		RR42_RS15280	0.38	-1.8
3,306,035	-		RR42_RS15280	0.38	-0.8
3,306,046	+		RR42_RS15280	0.38	-0.5
3,306,047	-		RR42_RS15280	0.38	-1.3
3,306,047	-		RR42_RS15280	0.38	+0.2
3,306,050	+		RR42_RS15280	0.39	+0.1
3,306,118	+		RR42_RS15280	0.43	-0.8
3,306,119	-		RR42_RS15280	0.43	-1.9
3,306,188	+		RR42_RS15280	0.47	+1.4
3,306,270	-		RR42_RS15280	0.51	+0.9
3,306,301	+		RR42_RS15280	0.53	+0.2