Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15195

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,290,118	+				-1.1
3,290,118	+				+1.0
3,290,346	+		RR42_RS15190	0.32	+0.6
3,290,346	+		RR42_RS15190	0.32	+0.0
3,290,347	-		RR42_RS15190	0.32	+1.2
3,290,347	-		RR42_RS15190	0.32	-0.3
3,290,368	-		RR42_RS15190	0.34	-0.4
3,290,368	-		RR42_RS15190	0.34	+0.5
3,290,505	+		RR42_RS15190	0.48	+0.3
3,290,506	-		RR42_RS15190	0.48	-0.8
3,290,805	+		RR42_RS15190	0.79	-0.8
3,290,805	+		RR42_RS15190	0.79	+0.5
3,290,805	+		RR42_RS15190	0.79	-0.3
3,290,806	-		RR42_RS15190	0.79	-0.5
3,290,806	-		RR42_RS15190	0.79	-0.4
3,290,806	-		RR42_RS15190	0.79	-1.9
3,291,012	+				+0.5
3,291,013	-				+2.8
3,291,017	+				+0.3
3,291,017	+				+0.8
3,291,017	+				+0.5
3,291,018	-				+1.2
3,291,018	-				+0.5
3,291,018	-				-1.4
3,291,370	+		RR42_RS15195	0.18	+0.2
3,291,370	+		RR42_RS15195	0.18	+0.4
3,291,385	+		RR42_RS15195	0.18	+0.2
3,291,548	-		RR42_RS15195	0.28	+0.5
3,291,548	-		RR42_RS15195	0.28	-0.5
3,291,616	+		RR42_RS15195	0.33	-2.7
3,291,730	+		RR42_RS15195	0.40	-0.2
3,291,730	+		RR42_RS15195	0.40	-1.1
3,291,731	-		RR42_RS15195	0.40	-0.3
3,291,731	-		RR42_RS15195	0.40	+1.6
3,291,811	+		RR42_RS15195	0.45	-2.3
3,291,811	+		RR42_RS15195	0.45	+0.0
3,291,811	+		RR42_RS15195	0.45	+1.3
3,291,811	+		RR42_RS15195	0.45	-0.9
3,292,013	-		RR42_RS15195	0.57	-0.4
3,292,075	+		RR42_RS15195	0.61	-0.3
3,292,075	+		RR42_RS15195	0.61	+0.5
3,292,076	-		RR42_RS15195	0.61	+0.0
3,292,159	+		RR42_RS15195	0.66	-0.1
3,292,159	+		RR42_RS15195	0.66	-0.2
3,292,159	+		RR42_RS15195	0.66	-4.0
3,292,159	+		RR42_RS15195	0.66	-0.1
3,292,159	+		RR42_RS15195	0.66	+1.1
3,292,160	-		RR42_RS15195	0.66	+0.8
3,292,160	-		RR42_RS15195	0.66	+0.7
3,292,160	-		RR42_RS15195	0.66	-1.7
3,292,213	+		RR42_RS15195	0.69	-0.9
3,292,213	+		RR42_RS15195	0.69	-1.0
3,292,213	+		RR42_RS15195	0.69	-0.5
3,292,213	+		RR42_RS15195	0.69	-0.6
3,292,278	-		RR42_RS15195	0.73	-0.4
3,292,453	+		RR42_RS15195	0.84	-0.8
3,292,454	-		RR42_RS15195	0.84	+0.3
3,292,454	-		RR42_RS15195	0.84	+0.3
3,292,600	+				-0.6
3,292,600	+				+0.4
3,292,627	-				+0.2
3,292,660	+				-0.3
3,292,660	+				-2.7
3,292,661	-				+1.1
3,292,661	-				-0.9
3,292,722	+				-0.9
3,292,722	+				+1.0
3,292,723	-				-0.2
3,292,723	-				-0.3
3,292,725	+				+0.5
3,292,725	+				+0.3
3,292,936	-				+0.2
3,292,936	-				+0.1
3,292,936	-				-0.4
3,292,983	+				-1.1
3,292,984	-				+0.3
3,292,984	-				+1.2
3,293,124	-		RR42_RS15200	0.17	-2.0
3,293,550	+		RR42_RS15200	0.67	+0.4
3,293,550	+		RR42_RS15200	0.67	-0.9
3,293,551	-		RR42_RS15200	0.67	-0.8
3,293,551	-		RR42_RS15200	0.67	-0.0
3,293,551	-		RR42_RS15200	0.67	+0.2