Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15125

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,271,795	+		RR42_RS15115	0.57	-0.3
3,271,982	+		RR42_RS15115	0.75	+0.3
3,271,983	-		RR42_RS15115	0.75	-0.8
3,271,983	-		RR42_RS15115	0.75	-1.3
3,272,015	-		RR42_RS15115	0.78	+0.3
3,272,147	-				+0.9
3,272,215	+				-0.3
3,272,215	+				+0.3
3,272,216	-				-1.0
3,272,350	+				-1.1
3,272,350	+				+1.2
3,272,351	-				-0.2
3,272,351	-				-2.1
3,272,351	-				+0.3
3,272,417	+		RR42_RS15120	0.36	-0.4
3,272,520	+				-1.1
3,272,520	+				-0.7
3,272,521	-				+1.0
3,272,521	-				-0.6
3,272,521	-				-0.4
3,272,527	+				-0.7
3,272,661	-				-0.6
3,272,833	+		RR42_RS15125	0.26	+1.7
3,272,834	-		RR42_RS15125	0.26	-1.6
3,272,834	-		RR42_RS15125	0.26	-0.8
3,272,834	-		RR42_RS15125	0.26	-1.8
3,272,956	+		RR42_RS15125	0.42	-2.9
3,272,956	+		RR42_RS15125	0.42	-0.1
3,272,957	-		RR42_RS15125	0.42	-1.0
3,272,965	+				+0.8
3,272,980	+		RR42_RS15125	0.45	-0.4
3,273,054	-		RR42_RS15125	0.54	-0.3
3,273,122	+		RR42_RS15125	0.63	+1.0
3,273,266	+		RR42_RS15125	0.82	-2.3
3,273,266	+		RR42_RS15125	0.82	+1.8
3,273,266	+		RR42_RS15125	0.82	+0.2
3,273,266	+		RR42_RS15125	0.82	+0.8
3,273,266	+		RR42_RS15125	0.82	+1.2
3,273,267	-		RR42_RS15125	0.82	+0.9
3,273,274	+		RR42_RS15125	0.83	-0.5
3,273,274	+		RR42_RS15125	0.83	-2.4
3,273,274	+		RR42_RS15125	0.83	+1.2
3,273,274	+		RR42_RS15125	0.83	-1.3
3,273,275	-		RR42_RS15125	0.83	+0.1
3,273,275	-		RR42_RS15125	0.83	+0.2
3,273,480	-				+0.9
3,273,485	-				-1.8
3,273,485	-				+0.6
3,273,540	+				-0.1
3,273,541	-				-0.4
3,273,687	+		RR42_RS15130	0.12	-3.6
3,273,688	-		RR42_RS15130	0.12	-1.3
3,273,867	+		RR42_RS15130	0.27	-0.0
3,273,867	+		RR42_RS15130	0.27	+0.5
3,273,868	-		RR42_RS15130	0.27	-0.1
3,273,868	-		RR42_RS15130	0.27	-2.5
3,273,868	-		RR42_RS15130	0.27	-0.9
3,273,868	-		RR42_RS15130	0.27	+0.3
3,273,871	+		RR42_RS15130	0.27	-0.4
3,273,871	+		RR42_RS15130	0.27	-0.8
3,273,871	+		RR42_RS15130	0.27	+0.0
3,273,871	+		RR42_RS15130	0.27	-0.3
3,273,871	+		RR42_RS15130	0.27	-0.2