Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14725

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,172,659	+		RR42_RS14720	0.63	+1.9
3,173,432	+				-0.4
3,173,432	+				-0.3
3,173,432	+				-0.2
3,173,433	-				+0.2
3,173,523	+				+0.4
3,173,524	-				+0.4
3,173,664	+		RR42_RS14725	0.11	+1.3
3,173,664	+		RR42_RS14725	0.11	+0.7
3,173,664	+		RR42_RS14725	0.11	-0.8
3,173,664	+		RR42_RS14725	0.11	+0.5
3,173,665	-		RR42_RS14725	0.11	+1.3
3,173,665	-		RR42_RS14725	0.11	-0.2
3,173,665	-		RR42_RS14725	0.11	+1.0
3,173,709	+		RR42_RS14725	0.15	+0.2
3,173,710	-		RR42_RS14725	0.15	+0.8
3,174,009	+		RR42_RS14725	0.39	-0.3
3,174,009	+		RR42_RS14725	0.39	+0.4
3,174,084	+		RR42_RS14725	0.45	+0.2
3,174,084	+		RR42_RS14725	0.45	-0.6
3,174,084	+		RR42_RS14725	0.45	-0.6
3,174,084	+		RR42_RS14725	0.45	+0.8
3,174,084	+		RR42_RS14725	0.45	-1.9
3,174,084	+		RR42_RS14725	0.45	-0.7
3,174,084	+		RR42_RS14725	0.45	-0.5
3,174,084	+		RR42_RS14725	0.45	+0.1
3,174,084	+		RR42_RS14725	0.45	+1.0
3,174,084	+		RR42_RS14725	0.45	-0.0
3,174,084	+		RR42_RS14725	0.45	+0.0
3,174,085	-		RR42_RS14725	0.45	-0.2
3,174,085	-		RR42_RS14725	0.45	-1.1
3,174,085	-		RR42_RS14725	0.45	-0.1
3,174,085	-		RR42_RS14725	0.45	-1.1
3,174,085	-		RR42_RS14725	0.45	+0.4
3,174,085	-		RR42_RS14725	0.45	+0.9
3,174,085	-		RR42_RS14725	0.45	+0.3
3,174,085	-		RR42_RS14725	0.45	-1.1
3,174,085	-		RR42_RS14725	0.45	+1.6
3,174,085	-		RR42_RS14725	0.45	-1.8
3,174,088	+		RR42_RS14725	0.45	+0.6
3,174,088	+		RR42_RS14725	0.45	-3.1
3,174,088	+		RR42_RS14725	0.45	-0.1
3,174,088	+		RR42_RS14725	0.45	-0.2
3,174,089	-		RR42_RS14725	0.45	+0.7
3,174,307	-		RR42_RS14725	0.62	-0.1
3,174,307	-		RR42_RS14725	0.62	+0.6
3,174,880	+				+1.2
3,174,881	-				-0.4
3,174,881	-				+0.3
3,175,035	+		RR42_RS14730	0.10	-2.6
3,175,035	+		RR42_RS14730	0.10	+0.8
3,175,036	-		RR42_RS14730	0.10	-0.1
3,175,036	-		RR42_RS14730	0.10	-1.6
3,175,036	-		RR42_RS14730	0.10	+1.2
3,175,037	+		RR42_RS14730	0.10	+0.7
3,175,038	-		RR42_RS14730	0.10	+1.5
3,175,038	-		RR42_RS14730	0.10	+0.8
3,175,038	-		RR42_RS14730	0.10	-1.5
3,175,038	-		RR42_RS14730	0.10	-1.8
3,175,051	-		RR42_RS14730	0.11	+0.3
3,175,051	-		RR42_RS14730	0.11	+0.7
3,175,268	+		RR42_RS14730	0.31	+0.5
3,175,268	+		RR42_RS14730	0.31	-0.6
3,175,552	-		RR42_RS14730	0.57	+0.2
3,175,565	+		RR42_RS14730	0.58	-1.0
3,175,565	+		RR42_RS14730	0.58	-1.3
3,175,565	+		RR42_RS14730	0.58	+0.0
3,175,566	-		RR42_RS14730	0.58	+0.2
3,175,566	-		RR42_RS14730	0.58	+0.7
3,175,566	-		RR42_RS14730	0.58	-0.3
3,175,566	-		RR42_RS14730	0.58	-3.3
3,175,712	+		RR42_RS14730	0.71	+0.7
3,175,712	+		RR42_RS14730	0.71	-2.9
3,175,715	+		RR42_RS14730	0.72	-0.4
3,175,715	+		RR42_RS14730	0.72	+0.6
3,175,766	+		RR42_RS14730	0.76	-0.0
3,175,767	-		RR42_RS14730	0.76	-1.5
3,175,767	-		RR42_RS14730	0.76	-3.3
3,175,767	-		RR42_RS14730	0.76	+0.0
3,175,767	-		RR42_RS14730	0.76	-0.1