Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14695

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,166,622	+		RR42_RS14690	0.23	+1.1
3,166,821	-		RR42_RS14690	0.44	+0.1
3,166,821	-		RR42_RS14690	0.44	+0.6
3,166,821	-		RR42_RS14690	0.44	-1.2
3,166,821	-		RR42_RS14690	0.44	+0.9
3,167,058	-		RR42_RS14690	0.70	+0.8
3,167,094	-		RR42_RS14690	0.74	-2.7
3,167,201	+		RR42_RS14690	0.85	-0.1
3,167,202	-		RR42_RS14690	0.85	-1.7
3,167,226	-		RR42_RS14690	0.88	+0.6
3,167,288	+				+0.3
3,167,289	-				-0.5
3,167,289	-				-1.0
3,167,289	-				+0.2
3,167,392	+				-0.4
3,167,456	+				+0.7
3,167,456	+				-0.6
3,167,456	+				-0.7
3,167,456	+				-0.3
3,167,457	-				-0.7
3,167,457	-				-1.2
3,167,457	-				-1.2
3,167,457	-				+0.7
3,167,457	-				-0.3
3,167,457	-				+0.6
3,167,457	-				-0.4
3,167,458	+				+0.0
3,167,459	-				+1.2
3,167,643	-		RR42_RS14695	0.16	+0.7
3,167,643	-		RR42_RS14695	0.16	+0.2
3,167,643	-		RR42_RS14695	0.16	+0.9
3,167,946	+		RR42_RS14695	0.41	+0.2
3,167,946	+		RR42_RS14695	0.41	-0.4
3,167,976	+		RR42_RS14695	0.43	+0.7
3,167,976	+		RR42_RS14695	0.43	+1.1
3,167,976	+		RR42_RS14695	0.43	-0.6
3,167,977	-		RR42_RS14695	0.44	+0.3
3,168,034	+		RR42_RS14695	0.48	+0.9
3,168,034	+		RR42_RS14695	0.48	+0.8
3,168,034	+		RR42_RS14695	0.48	+0.7
3,168,189	+		RR42_RS14695	0.61	-1.8
3,168,190	-		RR42_RS14695	0.61	-1.6
3,168,196	+		RR42_RS14695	0.62	-0.0
3,168,197	-		RR42_RS14695	0.62	-0.6
3,168,197	-		RR42_RS14695	0.62	+0.2
3,168,197	-		RR42_RS14695	0.62	+1.1
3,168,197	-		RR42_RS14695	0.62	-3.0
3,168,284	+		RR42_RS14695	0.69	+0.4
3,168,336	+		RR42_RS14695	0.74	-0.7
3,168,338	+		RR42_RS14695	0.74	-0.2
3,168,338	+		RR42_RS14695	0.74	-0.6
3,168,339	-		RR42_RS14695	0.74	-0.4
3,168,660	+				-0.8
3,168,660	+				+0.9
3,168,661	-				+0.6
3,168,661	-				-0.6
3,168,661	-				+0.2
3,168,662	+				-2.2
3,168,663	-				-0.4
3,168,663	-				-0.7
3,168,663	-				-2.0
3,168,663	-				-1.1
3,168,663	-				+1.2
3,168,802	-		RR42_RS14700	0.31	+0.4
3,168,802	-		RR42_RS14700	0.31	-0.1
3,168,822	+		RR42_RS14700	0.35	-1.1
3,169,032	-		RR42_RS14700	0.80	-0.6
3,169,276	+				-1.8
3,169,276	+				+0.8
3,169,277	-				-0.8
3,169,277	-				+0.3
3,169,369	+				-1.1
3,169,369	+				-0.6
3,169,370	-				+0.4
3,169,370	-				+1.2
3,169,370	-				-2.4
3,169,452	+				-1.1
3,169,452	+				-0.4
3,169,452	+				-2.6
3,169,452	+				-2.3
3,169,453	-				+0.2
3,169,453	-				-0.8
3,169,453	-				-1.4
3,169,453	-				-1.2
3,169,456	+				-0.1
3,169,456	+				-0.2
3,169,456	+				-0.6
3,169,456	+				+0.6
3,169,457	-				-0.2
3,169,457	-				+1.1
3,169,457	-				-2.3
3,169,457	-				+1.2
3,169,457	-				+0.5
3,169,459	+				+0.2
3,169,560	+		RR42_RS14705	0.35	+3.2
3,169,560	+		RR42_RS14705	0.35	+0.9
3,169,609	+		RR42_RS14705	0.50	-0.6
3,169,609	+		RR42_RS14705	0.50	-0.6
3,169,610	-		RR42_RS14705	0.50	+0.8