Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14685

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,163,225	+		RR42_RS14680	0.60	-0.1
3,163,225	+		RR42_RS14680	0.60	-2.1
3,163,309	+		RR42_RS14680	0.66	+0.4
3,163,309	+		RR42_RS14680	0.66	-0.4
3,163,309	+		RR42_RS14680	0.66	+0.4
3,163,309	+		RR42_RS14680	0.66	+0.4
3,163,309	+		RR42_RS14680	0.66	-1.2
3,163,309	+		RR42_RS14680	0.66	+0.6
3,163,309	+		RR42_RS14680	0.66	-0.6
3,163,310	-		RR42_RS14680	0.67	+1.0
3,163,366	+		RR42_RS14680	0.71	-2.4
3,163,366	+		RR42_RS14680	0.71	+1.2
3,163,367	-		RR42_RS14680	0.71	-0.6
3,163,367	-		RR42_RS14680	0.71	-1.1
3,163,367	-		RR42_RS14680	0.71	+0.5
3,163,516	+		RR42_RS14680	0.83	+0.3
3,163,516	+		RR42_RS14680	0.83	+0.2
3,163,516	+		RR42_RS14680	0.83	-0.4
3,163,517	-		RR42_RS14680	0.83	-0.5
3,163,517	-		RR42_RS14680	0.83	+1.2
3,163,597	+		RR42_RS14680	0.90	-1.6
3,163,597	+		RR42_RS14680	0.90	-0.0
3,163,615	+				-1.8
3,163,615	+				-0.0
3,163,615	+				+0.6
3,163,615	+				+0.1
3,163,616	-				+0.2
3,163,616	-				-0.6
3,163,616	-				-2.0
3,163,652	+				-1.4
3,163,806	+				+1.2
3,163,807	-				-0.1
3,163,807	-				-1.4
3,163,935	-				+0.0
3,164,057	+				+1.7
3,164,058	-				+1.4
3,164,058	-				+0.5
3,164,058	-				-1.8
3,164,156	+		RR42_RS14685	0.12	-0.6
3,164,156	+		RR42_RS14685	0.12	+0.5
3,164,156	+		RR42_RS14685	0.12	+0.4
3,164,157	-		RR42_RS14685	0.12	+1.2
3,164,300	+		RR42_RS14685	0.19	-0.0
3,164,473	+		RR42_RS14685	0.28	+0.5
3,164,473	+		RR42_RS14685	0.28	-1.1
3,164,473	+		RR42_RS14685	0.28	+1.6
3,164,473	+		RR42_RS14685	0.28	+0.0
3,164,473	+		RR42_RS14685	0.28	+0.1
3,164,473	+		RR42_RS14685	0.28	+0.5
3,164,474	-		RR42_RS14685	0.28	-1.3
3,164,474	-		RR42_RS14685	0.28	-0.8
3,164,474	-		RR42_RS14685	0.28	+0.2
3,164,474	-		RR42_RS14685	0.28	-0.0
3,164,589	-		RR42_RS14685	0.34	-0.8
3,164,699	+		RR42_RS14685	0.40	+0.6
3,165,386	-		RR42_RS14685	0.76	+0.5
3,165,554	+		RR42_RS14685	0.84	+0.4
3,165,647	+		RR42_RS14685	0.89	-1.1
3,165,648	-		RR42_RS14685	0.89	+0.3
3,165,865	-				-1.0
3,165,997	+				-1.1
3,165,997	+				+0.6
3,165,998	-				+0.1
3,166,132	+				-0.5
3,166,132	+				-0.3
3,166,132	+				+1.1
3,166,132	+				+1.0
3,166,133	-				+0.7
3,166,133	-				-0.8
3,166,133	-				-0.6
3,166,133	-				+0.9
3,166,133	-				-0.8
3,166,155	+				+0.8
3,166,161	+				+1.0
3,166,161	+				-0.2
3,166,162	-				+0.1
3,166,332	+				-0.7
3,166,332	+				+0.6
3,166,333	-				+0.5
3,166,622	+		RR42_RS14690	0.23	+1.1
3,166,821	-		RR42_RS14690	0.44	+0.1
3,166,821	-		RR42_RS14690	0.44	+0.6
3,166,821	-		RR42_RS14690	0.44	-1.2
3,166,821	-		RR42_RS14690	0.44	+0.9