Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14600

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,140,101	+		RR42_RS14595	0.30	+0.5
3,140,102	-		RR42_RS14595	0.30	-0.9
3,140,225	-		RR42_RS14595	0.40	+0.7
3,140,353	+		RR42_RS14595	0.51	+0.2
3,140,354	-		RR42_RS14595	0.51	-0.4
3,140,407	+		RR42_RS14595	0.56	+2.2
3,140,407	+		RR42_RS14595	0.56	+1.4
3,140,408	-		RR42_RS14595	0.56	+0.4
3,140,408	-		RR42_RS14595	0.56	+0.3
3,140,521	-		RR42_RS14595	0.65	+2.0
3,140,548	+		RR42_RS14595	0.68	+2.1
3,140,548	+		RR42_RS14595	0.68	-1.7
3,140,548	+		RR42_RS14595	0.68	+0.5
3,140,767	+		RR42_RS14595	0.86	-2.0
3,140,767	+		RR42_RS14595	0.86	-0.4
3,140,767	+		RR42_RS14595	0.86	+0.5
3,140,767	+		RR42_RS14595	0.86	-0.2
3,140,768	-		RR42_RS14595	0.86	+1.4
3,140,768	-		RR42_RS14595	0.86	-0.8
3,140,962	+				-1.0
3,140,963	-				+0.3
3,140,963	-				+0.3
3,141,006	+				+0.2
3,141,096	+				-0.4
3,141,217	+		RR42_RS14600	0.20	+0.3
3,141,217	+		RR42_RS14600	0.20	+1.7
3,141,217	+		RR42_RS14600	0.20	+0.5
3,141,217	+		RR42_RS14600	0.20	-0.5
3,141,217	+		RR42_RS14600	0.20	-0.2
3,141,218	-		RR42_RS14600	0.20	-1.6
3,141,218	-		RR42_RS14600	0.20	-1.1
3,141,218	-		RR42_RS14600	0.20	+0.4
3,141,218	-		RR42_RS14600	0.20	+0.7
3,141,296	+		RR42_RS14600	0.32	+0.6
3,141,296	+		RR42_RS14600	0.32	-2.0
3,141,296	+		RR42_RS14600	0.32	-1.4
3,141,297	-		RR42_RS14600	0.32	+1.0
3,141,297	-		RR42_RS14600	0.32	-1.3
3,141,297	-		RR42_RS14600	0.32	+0.6
3,141,326	-		RR42_RS14600	0.37	-1.6
3,141,745	+				+0.5
3,141,745	+				-1.7
3,141,745	+				-0.4
3,141,746	-				-0.8
3,141,746	-				-1.7
3,141,746	-				+0.2
3,141,770	-				-0.5
3,141,907	+		RR42_RS14605	0.21	-0.0
3,141,907	+		RR42_RS14605	0.21	-1.4
3,141,907	+		RR42_RS14605	0.21	-0.7
3,141,907	+		RR42_RS14605	0.21	-0.7
3,141,908	-		RR42_RS14605	0.21	-1.2
3,141,908	-		RR42_RS14605	0.21	+2.2
3,141,908	-		RR42_RS14605	0.21	+0.3
3,142,153	+		RR42_RS14605	0.59	+0.5
3,142,153	+		RR42_RS14605	0.59	-0.7
3,142,154	-		RR42_RS14605	0.59	+1.1
3,142,162	+		RR42_RS14605	0.60	-0.4
3,142,177	+		RR42_RS14605	0.63	-1.8
3,142,178	-		RR42_RS14605	0.63	+0.8
3,142,330	+		RR42_RS14605	0.86	+1.7
3,142,330	+		RR42_RS14605	0.86	-1.0
3,142,330	+		RR42_RS14605	0.86	+0.8
3,142,331	-		RR42_RS14605	0.86	+1.6
3,142,331	-		RR42_RS14605	0.86	+1.3
3,142,331	-		RR42_RS14605	0.86	+0.1
3,142,331	-		RR42_RS14605	0.86	-0.9
3,142,331	-		RR42_RS14605	0.86	+1.5
3,142,476	+				+1.0
3,142,476	+				+0.6
3,142,540	+				+0.5
3,142,540	+				+0.7
3,142,541	-				-1.6
3,142,541	-				-0.3
3,142,541	-				-0.2
3,142,541	-				+0.6
3,142,541	-				+0.0
3,142,541	-				+0.1
3,142,541	-				-0.1
3,142,567	+				-0.5
3,142,567	+				+0.4
3,142,568	-				+1.2
3,142,657	+				-0.3
3,142,685	-				-0.2
3,142,728	-				-2.7