Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12045

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,581,717	+		RR42_RS12040	0.34	-2.5
2,581,717	+		RR42_RS12040	0.34	-3.6
2,581,751	+		RR42_RS12040	0.37	-3.4
2,581,812	-		RR42_RS12040	0.41	-1.8
2,581,812	-		RR42_RS12040	0.41	-1.5
2,581,827	+		RR42_RS12040	0.43	-3.1
2,581,919	-		RR42_RS12040	0.50	-4.7
2,581,919	-		RR42_RS12040	0.50	-3.0
2,582,192	+		RR42_RS12040	0.70	-4.6
2,582,252	+		RR42_RS12040	0.75	-3.9
2,582,252	+		RR42_RS12040	0.75	-2.2
2,582,253	-		RR42_RS12040	0.75	-3.5
2,582,253	-		RR42_RS12040	0.75	-3.2
2,582,253	-		RR42_RS12040	0.75	-3.5
2,582,268	-		RR42_RS12040	0.76	-1.7
2,582,303	+		RR42_RS12040	0.79	-5.1
2,582,303	+		RR42_RS12040	0.79	-5.5
2,582,426	+		RR42_RS12040	0.88	-1.7
2,582,427	-		RR42_RS12040	0.88	-1.5
2,582,528	+				-3.0
2,582,529	-				-1.6
2,582,582	+				-0.6
2,582,583	-				+0.6
2,582,583	-				-0.4
2,582,680	+				+0.1
2,583,001	-		RR42_RS12045	0.34	+0.7
2,583,021	+		RR42_RS12045	0.35	-0.4
2,583,021	+		RR42_RS12045	0.35	-0.2
2,583,021	+		RR42_RS12045	0.35	-0.5
2,583,021	+		RR42_RS12045	0.35	+0.4
2,583,103	+		RR42_RS12045	0.42	-1.0
2,583,777	+				-0.7
2,583,777	+				+0.7
2,583,778	-				+0.7
2,583,778	-				-0.0
2,583,778	-				-0.5
2,583,778	-				-1.1
2,583,853	+		RR42_RS12050	0.11	-0.3
2,583,853	+		RR42_RS12050	0.11	-0.0
2,583,853	+		RR42_RS12050	0.11	-1.2
2,583,880	+		RR42_RS12050	0.14	-3.2
2,583,880	+		RR42_RS12050	0.14	-3.5
2,583,880	+		RR42_RS12050	0.14	-3.0
2,583,881	-		RR42_RS12050	0.14	-2.0
2,583,884	+		RR42_RS12050	0.14	-2.5
2,583,885	-		RR42_RS12050	0.14	-1.2
2,584,004	-		RR42_RS12050	0.27	-1.5
2,584,121	+		RR42_RS12050	0.39	-1.8
2,584,121	+		RR42_RS12050	0.39	-1.8
2,584,121	+		RR42_RS12050	0.39	-2.2
2,584,121	+		RR42_RS12050	0.39	-4.5
2,584,122	-		RR42_RS12050	0.39	-2.1
2,584,122	-		RR42_RS12050	0.39	-1.7
2,584,344	-		RR42_RS12050	0.62	-0.3