Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11990

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,567,785	+		RR42_RS11985	0.44	-0.3
2,567,785	+		RR42_RS11985	0.44	+1.0
2,567,785	+		RR42_RS11985	0.44	+0.3
2,567,786	-		RR42_RS11985	0.44	-1.2
2,567,799	-		RR42_RS11985	0.45	+0.5
2,568,318	+				-0.2
2,568,460	-				-0.4
2,568,511	-				+0.2
2,568,540	+				-2.1
2,568,540	+				+0.3
2,568,540	+				+0.5
2,568,541	-				+0.5
2,568,541	-				+0.3
2,568,609	+				-0.9
2,568,641	-		RR42_RS11990	0.12	+0.4
2,568,685	-		RR42_RS11990	0.15	-0.1
2,568,685	-		RR42_RS11990	0.15	+0.4
2,568,780	-		RR42_RS11990	0.21	-0.8
2,568,780	-		RR42_RS11990	0.21	+0.7
2,568,780	-		RR42_RS11990	0.21	-1.1
2,568,783	+		RR42_RS11990	0.21	+2.1
2,568,783	+		RR42_RS11990	0.21	+1.6
2,568,783	+		RR42_RS11990	0.21	-0.4
2,568,783	+		RR42_RS11990	0.21	+2.2
2,568,784	-		RR42_RS11990	0.21	+0.2
2,568,784	-		RR42_RS11990	0.21	+0.2
2,568,784	-		RR42_RS11990	0.21	-1.7
2,568,786	+		RR42_RS11990	0.21	-0.4
2,568,787	-		RR42_RS11990	0.21	-0.9
2,568,787	-		RR42_RS11990	0.21	+0.4
2,568,854	+		RR42_RS11990	0.26	-0.3
2,568,940	-		RR42_RS11990	0.31	+1.1
2,569,018	-		RR42_RS11990	0.36	+0.0
2,569,018	-		RR42_RS11990	0.36	-1.2
2,569,018	-		RR42_RS11990	0.36	-0.1
2,569,131	+		RR42_RS11990	0.43	+0.4
2,569,131	+		RR42_RS11990	0.43	-0.5
2,569,132	-		RR42_RS11990	0.44	-2.6
2,569,482	+		RR42_RS11990	0.66	-0.0
2,569,740	+		RR42_RS11990	0.83	-0.9
2,569,740	+		RR42_RS11990	0.83	-2.5
2,569,741	-		RR42_RS11990	0.83	-0.7
2,569,767	+		RR42_RS11990	0.85	-1.4
2,569,767	+		RR42_RS11990	0.85	-1.9
2,569,768	-		RR42_RS11990	0.85	-1.1
2,569,899	+				+0.4
2,569,900	-				-1.4
2,570,291	+		RR42_RS11995	0.14	-0.4
2,570,291	+		RR42_RS11995	0.14	-0.9
2,570,291	+		RR42_RS11995	0.14	+0.2
2,570,292	-		RR42_RS11995	0.14	-2.8
2,570,334	+		RR42_RS11995	0.16	+0.2
2,570,335	-		RR42_RS11995	0.16	+0.4
2,570,862	-		RR42_RS11995	0.44	-1.5