Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11980

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,565,533	+		RR42_RS11975	0.12	+0.9
2,565,601	+		RR42_RS11975	0.18	-0.5
2,565,601	+		RR42_RS11975	0.18	+0.8
2,565,602	-		RR42_RS11975	0.18	+0.6
2,565,602	-		RR42_RS11975	0.18	+0.7
2,565,648	+		RR42_RS11975	0.22	+0.4
2,565,786	-		RR42_RS11975	0.35	-1.0
2,566,041	+		RR42_RS11975	0.59	-2.7
2,566,041	+		RR42_RS11975	0.59	-1.0
2,566,042	-		RR42_RS11975	0.59	-0.5
2,566,042	-		RR42_RS11975	0.59	-0.4
2,566,054	+		RR42_RS11975	0.60	+0.0
2,566,694	+		RR42_RS11980	0.26	+2.1
2,566,784	+		RR42_RS11980	0.36	+1.2
2,566,784	+		RR42_RS11980	0.36	+0.1
2,566,785	-		RR42_RS11980	0.36	+0.8
2,566,809	+		RR42_RS11980	0.39	-0.8
2,566,810	-		RR42_RS11980	0.39	+0.8
2,566,983	-		RR42_RS11980	0.58	-0.7
2,566,983	-		RR42_RS11980	0.58	+1.0
2,566,983	-		RR42_RS11980	0.58	-0.9
2,567,181	-		RR42_RS11980	0.79	+1.3
2,567,359	+				+0.8
2,567,384	-				+0.3
2,567,384	-				-0.2
2,567,384	-				-2.8
2,567,388	-				-0.4
2,567,389	+				+0.3
2,567,390	-				-1.5
2,567,785	+		RR42_RS11985	0.44	-0.3
2,567,785	+		RR42_RS11985	0.44	+1.0
2,567,785	+		RR42_RS11985	0.44	+0.3
2,567,786	-		RR42_RS11985	0.44	-1.2
2,567,799	-		RR42_RS11985	0.45	+0.5
2,568,318	+				-0.2