Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11330

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,423,139	+		RR42_RS11325	0.70	-2.1
2,423,139	+		RR42_RS11325	0.70	+1.4
2,423,214	+		RR42_RS11325	0.73	-0.3
2,423,225	-		RR42_RS11325	0.73	+0.8
2,423,248	-		RR42_RS11325	0.74	+1.5
2,423,446	+		RR42_RS11325	0.82	+0.4
2,423,469	+		RR42_RS11325	0.83	+0.4
2,423,470	-		RR42_RS11325	0.83	+0.6
2,423,546	-		RR42_RS11325	0.86	-1.5
2,423,808	+				+1.5
2,423,808	+				+0.3
2,423,808	+				+0.6
2,423,809	-				-0.3
2,423,809	-				-3.5
2,423,809	-				+0.3
2,423,852	+				+0.8
2,423,924	+				+0.2
2,423,924	+				+0.6
2,423,924	+				+2.1
2,423,924	+				-0.2
2,423,924	+				+0.6
2,423,924	+				+0.0
2,423,925	-				+0.5
2,423,928	+				+0.9
2,424,157	-				-0.5
2,424,181	-				+0.5
2,424,343	-		RR42_RS11330	0.15	-1.3
2,424,387	+		RR42_RS11330	0.18	-0.5
2,424,419	-		RR42_RS11330	0.21	-0.6
2,424,436	+		RR42_RS11330	0.22	-0.5
2,424,436	+		RR42_RS11330	0.22	-0.8
2,424,556	+		RR42_RS11330	0.30	+0.7
2,424,558	+		RR42_RS11330	0.30	-0.9
2,424,559	-		RR42_RS11330	0.30	-0.6
2,424,559	-		RR42_RS11330	0.30	+0.6
2,424,559	-		RR42_RS11330	0.30	+0.9
2,424,639	+		RR42_RS11330	0.36	-0.2
2,424,639	+		RR42_RS11330	0.36	-0.9
2,424,640	-		RR42_RS11330	0.36	-1.9
2,424,710	-		RR42_RS11330	0.41	-0.1
2,424,758	-		RR42_RS11330	0.44	-0.7
2,425,113	+		RR42_RS11330	0.69	+0.5
2,425,113	+		RR42_RS11330	0.69	-0.8
2,425,114	-		RR42_RS11330	0.69	+0.9
2,425,126	+		RR42_RS11330	0.70	-2.5
2,425,127	-		RR42_RS11330	0.70	-2.3
2,425,348	+		RR42_RS11330	0.85	+0.4
2,425,351	-		RR42_RS11330	0.86	+1.0
2,425,351	-		RR42_RS11330	0.86	-3.4
2,425,414	+				-0.1
2,425,522	+				+0.1
2,425,531	+				+0.7
2,425,623	+				-0.4
2,425,624	-				-1.6
2,425,721	-				-0.1
2,425,728	+				+0.7
2,425,743	-				+1.2
2,425,743	-				-0.4
2,425,781	+				+0.5
2,425,782	-				-2.0
2,425,782	-				+0.4
2,425,835	+		RR42_RS11335	0.12	-0.7
2,425,836	-		RR42_RS11335	0.12	-0.1
2,425,836	-		RR42_RS11335	0.12	+0.2
2,426,063	+		RR42_RS11335	0.49	-1.3
2,426,063	+		RR42_RS11335	0.49	-0.7
2,426,064	-		RR42_RS11335	0.49	-0.1
2,426,149	-		RR42_RS11335	0.63	-0.5
2,426,149	-		RR42_RS11335	0.63	-0.6
2,426,149	-		RR42_RS11335	0.63	+0.7
2,426,160	+		RR42_RS11335	0.65	-0.4
2,426,161	-		RR42_RS11335	0.65	+0.5
2,426,161	-		RR42_RS11335	0.65	-0.9
2,426,169	+		RR42_RS11335	0.66	+0.1
2,426,169	+		RR42_RS11335	0.66	+0.3
2,426,169	+		RR42_RS11335	0.66	-1.9
2,426,170	-		RR42_RS11335	0.67	-0.5
2,426,275	+		RR42_RS11335	0.84	+1.3
2,426,276	-		RR42_RS11335	0.84	+0.7
2,426,277	+		RR42_RS11335	0.84	+1.6
2,426,278	-		RR42_RS11335	0.84	-3.5
2,426,487	-				-1.0
2,426,497	-				-0.4
2,426,523	-				+0.3
2,426,523	-				+0.6
2,426,523	-				-1.3
2,426,526	+				+0.1
2,426,526	+				+1.6