Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11015

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,351,473	+				+0.0
2,351,473	+				-1.8
2,351,473	+				-0.7
2,351,473	+				+0.0
2,351,473	+				-0.2
2,351,474	-				-0.6
2,351,787	+		RR42_RS11010	0.44	-0.2
2,351,787	+		RR42_RS11010	0.44	+0.2
2,351,787	+		RR42_RS11010	0.44	-0.2
2,351,788	-		RR42_RS11010	0.44	-1.6
2,351,859	+		RR42_RS11010	0.58	+0.8
2,351,918	+		RR42_RS11010	0.69	+0.6
2,351,919	-		RR42_RS11010	0.70	+1.6
2,351,934	+		RR42_RS11010	0.72	-0.8
2,351,934	+		RR42_RS11010	0.72	-0.1
2,351,934	+		RR42_RS11010	0.72	-0.0
2,351,935	-		RR42_RS11010	0.73	-0.5
2,351,935	-		RR42_RS11010	0.73	+0.4
2,351,964	-		RR42_RS11010	0.78	+0.3
2,351,964	-		RR42_RS11010	0.78	+1.0
2,352,212	-				+0.6
2,352,216	+				+0.0
2,352,216	+				-2.5
2,352,216	+				-0.4
2,352,216	+				-2.4
2,352,526	-				+0.7
2,352,526	-				-1.6
2,352,526	-				-0.3
2,352,593	+		RR42_RS11020	0.29	+0.2
2,352,593	+		RR42_RS11020	0.29	-0.7
2,352,594	-		RR42_RS11020	0.30	-1.0
2,352,594	-		RR42_RS11020	0.30	+0.7
2,352,597	+		RR42_RS11020	0.31	-1.6
2,352,597	+		RR42_RS11020	0.31	+1.0
2,352,598	-		RR42_RS11020	0.31	-0.4
2,352,624	+		RR42_RS11020	0.39	+0.8
2,352,625	-		RR42_RS11020	0.39	-1.5
2,352,636	+		RR42_RS11020	0.43	-0.5
2,352,636	+		RR42_RS11020	0.43	+0.6
2,352,636	+		RR42_RS11020	0.43	+0.9
2,352,636	+		RR42_RS11020	0.43	+0.1
2,352,637	-		RR42_RS11020	0.43	-0.4
2,352,637	-		RR42_RS11020	0.43	-1.0
2,352,637	-		RR42_RS11020	0.43	+0.4
2,352,815	+				+0.8
2,352,911	+				+1.0
2,352,911	+				-2.1
2,353,126	+		RR42_RS11025	0.30	-0.0
2,353,127	-		RR42_RS11025	0.31	+0.0
2,353,127	-		RR42_RS11025	0.31	-0.6
2,353,136	+		RR42_RS11025	0.32	+0.9
2,353,136	+		RR42_RS11025	0.32	+0.0
2,353,220	+		RR42_RS11025	0.44	+0.8
2,353,409	-		RR42_RS11025	0.70	-0.8
2,353,409	-		RR42_RS11025	0.70	+0.6
2,353,409	-		RR42_RS11025	0.70	-2.6