Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10865

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,324,770	+				-0.4
2,324,870	+				-1.5
2,324,870	+				-0.1
2,324,876	-				+0.6
2,324,876	-				+0.8
2,324,876	-				-0.3
2,324,876	-				+0.3
2,325,003	+		RR42_RS10860	0.31	+0.8
2,325,003	+		RR42_RS10860	0.31	+0.6
2,325,003	+		RR42_RS10860	0.31	-1.0
2,325,004	-		RR42_RS10860	0.31	-1.3
2,325,004	-		RR42_RS10860	0.31	-0.5
2,325,121	+		RR42_RS10860	0.60	-0.4
2,325,121	+		RR42_RS10860	0.60	-0.6
2,325,121	+		RR42_RS10860	0.60	-0.3
2,325,121	+		RR42_RS10860	0.60	-2.7
2,325,121	+		RR42_RS10860	0.60	-3.0
2,325,122	-		RR42_RS10860	0.60	+0.1
2,325,130	+		RR42_RS10860	0.62	-3.2
2,325,130	+		RR42_RS10860	0.62	-1.7
2,325,130	+		RR42_RS10860	0.62	-0.5
2,325,130	+		RR42_RS10860	0.62	+0.7
2,325,131	-		RR42_RS10860	0.62	-0.6
2,325,371	+				+0.5
2,325,371	+				-0.4
2,325,371	+				+0.0
2,325,371	+				-1.3
2,325,372	-				+0.2
2,325,372	-				+1.9
2,325,372	-				-0.4
2,325,372	-				+0.3
2,325,375	+				-0.9
2,325,376	-				-0.1
2,325,376	-				-0.6
2,325,380	+				-0.6
2,325,380	+				+0.7
2,325,401	+				+1.5
2,325,402	-				+0.0
2,325,402	-				-1.3
2,325,739	-		RR42_RS10865	0.32	-0.9
2,325,739	-		RR42_RS10865	0.32	+1.5
2,325,763	+		RR42_RS10865	0.35	-1.0
2,325,909	+		RR42_RS10865	0.50	+1.7
2,326,188	+		RR42_RS10865	0.79	-2.3
2,326,188	+		RR42_RS10865	0.79	-2.6
2,326,189	-		RR42_RS10865	0.80	-1.2
2,326,189	-		RR42_RS10865	0.80	+0.6
2,326,189	-		RR42_RS10865	0.80	-1.4
2,326,189	-		RR42_RS10865	0.80	-1.0
2,326,189	-		RR42_RS10865	0.80	+0.2
2,326,189	-		RR42_RS10865	0.80	-2.4
2,326,192	-		RR42_RS10865	0.80	+2.2
2,326,417	+				-0.6
2,326,417	+				+0.4
2,326,450	+				-0.4
2,326,451	-				+0.4
2,326,493	+				-0.6
2,326,494	-				+1.0
2,326,562	+				-1.6
2,326,563	-				+0.8
2,326,563	-				-1.2
2,326,563	-				+0.0
2,326,819	+		RR42_RS10870	0.47	+0.0
2,326,820	-		RR42_RS10870	0.47	-0.5
2,326,820	-		RR42_RS10870	0.47	+0.4
2,326,820	-		RR42_RS10870	0.47	+0.6
2,326,820	-		RR42_RS10870	0.47	-2.7
2,327,044	+		RR42_RS10870	0.85	-1.2
2,327,045	-		RR42_RS10870	0.85	-0.4
2,327,045	-		RR42_RS10870	0.85	-0.4
2,327,045	-		RR42_RS10870	0.85	+0.5
2,327,283	+				+0.9
2,327,283	+				-1.0
2,327,306	+				-1.6
2,327,306	+				-0.4
2,327,306	+				-0.6
2,327,307	-				+0.1
2,327,307	-				-0.1
2,327,307	-				+0.5
2,327,307	-				+0.2
2,327,307	-				-0.4