Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10830

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,315,841	-		RR42_RS10825	0.39	-1.0
2,315,876	+		RR42_RS10825	0.41	+0.7
2,315,883	-		RR42_RS10825	0.41	-2.5
2,316,062	+		RR42_RS10825	0.53	-1.0
2,316,062	+		RR42_RS10825	0.53	-0.2
2,316,062	+		RR42_RS10825	0.53	-0.6
2,316,063	-		RR42_RS10825	0.53	+1.1
2,316,063	-		RR42_RS10825	0.53	+0.5
2,316,063	-		RR42_RS10825	0.53	+1.0
2,316,063	-		RR42_RS10825	0.53	-0.1
2,316,188	-		RR42_RS10825	0.61	+1.5
2,316,434	+		RR42_RS10825	0.76	+1.0
2,316,469	+		RR42_RS10825	0.79	-1.2
2,316,488	-		RR42_RS10825	0.80	-1.3
2,316,509	+		RR42_RS10825	0.81	-2.8
2,316,509	+		RR42_RS10825	0.81	+0.3
2,316,509	+		RR42_RS10825	0.81	+0.0
2,316,509	+		RR42_RS10825	0.81	+1.4
2,316,510	-		RR42_RS10825	0.81	+1.2
2,316,510	-		RR42_RS10825	0.81	+0.3
2,316,579	-		RR42_RS10825	0.86	+0.2
2,316,579	-		RR42_RS10825	0.86	+0.9
2,316,687	+				+0.5
2,316,687	+				+0.3
2,316,688	-				+0.3
2,316,688	-				+1.3
2,316,688	-				-2.2
2,316,688	-				+0.0
2,316,704	+				-1.5
2,316,833	+				-1.6
2,316,834	-				-0.5
2,317,026	+		RR42_RS10830	0.16	-0.1
2,317,026	+		RR42_RS10830	0.16	+0.3
2,317,026	+		RR42_RS10830	0.16	-0.2
2,317,026	+		RR42_RS10830	0.16	+0.3
2,317,027	-		RR42_RS10830	0.16	-0.3
2,317,242	+		RR42_RS10830	0.33	-3.0
2,317,243	-		RR42_RS10830	0.33	+1.8
2,317,243	-		RR42_RS10830	0.33	-2.1
2,317,243	-		RR42_RS10830	0.33	+0.2
2,317,329	+		RR42_RS10830	0.39	+0.2
2,317,345	-		RR42_RS10830	0.40	-1.3
2,317,392	+		RR42_RS10830	0.44	-0.1
2,317,393	-		RR42_RS10830	0.44	-0.3
2,317,561	-		RR42_RS10830	0.57	-0.5
2,317,857	+		RR42_RS10830	0.80	-0.5
2,317,858	-		RR42_RS10830	0.80	-0.0
2,317,858	-		RR42_RS10830	0.80	+1.2
2,317,956	+		RR42_RS10830	0.88	-1.9
2,317,956	+		RR42_RS10830	0.88	-0.5
2,317,957	-		RR42_RS10830	0.88	+0.5
2,317,957	-		RR42_RS10830	0.88	-2.2
2,317,980	+		RR42_RS10830	0.89	-3.0
2,317,980	+		RR42_RS10830	0.89	-1.2
2,317,981	-		RR42_RS10830	0.89	+0.5
2,318,287	-		RR42_RS10835	0.23	+0.2
2,318,287	-		RR42_RS10835	0.23	+0.2
2,318,287	-		RR42_RS10835	0.23	+0.2
2,318,352	+		RR42_RS10835	0.35	-0.3
2,318,352	+		RR42_RS10835	0.35	-2.6
2,318,394	+		RR42_RS10835	0.43	+0.7
2,318,625	+		RR42_RS10835	0.86	+0.2
2,318,626	-		RR42_RS10835	0.86	-0.6
2,318,835	+		RR42_RS10840	0.23	+1.2
2,318,835	+		RR42_RS10840	0.23	+0.4
2,318,836	-		RR42_RS10840	0.23	+0.2
2,318,843	+		RR42_RS10840	0.24	-1.5
2,318,843	+		RR42_RS10840	0.24	-0.2
2,318,844	-		RR42_RS10840	0.24	-0.3
2,318,844	-		RR42_RS10840	0.24	-0.5
2,318,846	+		RR42_RS10840	0.25	-0.7
2,318,847	-		RR42_RS10840	0.25	-0.8
2,318,913	-		RR42_RS10840	0.36	+0.7
2,318,913	-		RR42_RS10840	0.36	-2.3
2,318,913	-		RR42_RS10840	0.36	+1.2
2,318,987	+		RR42_RS10840	0.48	+0.7
2,318,987	+		RR42_RS10840	0.48	-0.1
2,318,987	+		RR42_RS10840	0.48	+1.4
2,318,987	+		RR42_RS10840	0.48	+1.7
2,318,987	+		RR42_RS10840	0.48	-1.2
2,318,988	-		RR42_RS10840	0.49	+0.1