Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10545

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,253,548	+		RR42_RS10540	0.68	+0.2
2,253,549	-		RR42_RS10540	0.69	+1.0
2,253,549	-		RR42_RS10540	0.69	-1.3
2,254,132	+		RR42_RS10545	0.16	-1.0
2,254,133	-		RR42_RS10545	0.16	-0.4
2,254,400	+		RR42_RS10545	0.43	-0.3
2,254,401	-		RR42_RS10545	0.43	-1.7
2,254,835	+		RR42_RS10545	0.87	+0.4
2,254,850	+		RR42_RS10545	0.89	-1.6
2,255,039	-				-0.5
2,255,404	+		RR42_RS10550	0.31	-2.0
2,255,405	-		RR42_RS10550	0.31	-2.6
2,255,405	-		RR42_RS10550	0.31	-2.3
2,255,405	-		RR42_RS10550	0.31	+0.3
2,255,473	+		RR42_RS10550	0.37	-1.1
2,255,474	-		RR42_RS10550	0.37	+1.5
2,255,636	-		RR42_RS10550	0.50	-1.3
2,255,636	-		RR42_RS10550	0.50	-0.1
2,255,731	+		RR42_RS10550	0.57	+0.5
2,255,731	+		RR42_RS10550	0.57	+1.0
2,255,732	-		RR42_RS10550	0.57	-0.2
2,255,732	-		RR42_RS10550	0.57	+0.9
2,255,905	+		RR42_RS10550	0.71	-0.1
2,255,905	+		RR42_RS10550	0.71	+0.2