Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10280

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,200,142	+		RR42_RS10270	0.88	+0.8
2,200,353	-				-2.0
2,200,461	-		RR42_RS10275	0.14	-0.2
2,200,461	-		RR42_RS10275	0.14	-1.0
2,200,525	+		RR42_RS10275	0.24	+0.1
2,200,548	-		RR42_RS10275	0.27	-1.0
2,200,548	-		RR42_RS10275	0.27	+1.8
2,200,634	-		RR42_RS10275	0.41	+0.3
2,200,707	-		RR42_RS10275	0.52	-0.1
2,200,707	-		RR42_RS10275	0.52	+0.6
2,200,707	-		RR42_RS10275	0.52	+0.3
2,200,742	+		RR42_RS10275	0.58	-0.6
2,201,012	+				-1.8
2,201,231	-		RR42_RS10280	0.19	+0.2
2,201,300	+		RR42_RS10280	0.25	-0.0
2,201,301	-		RR42_RS10280	0.25	-2.2
2,201,346	+		RR42_RS10280	0.29	+1.0
2,201,350	-		RR42_RS10280	0.30	-0.0
2,201,696	-		RR42_RS10280	0.60	+0.4
2,201,710	-		RR42_RS10280	0.61	+1.6
2,202,059	+				-0.1
2,202,059	+				-2.1
2,202,059	+				-1.8
2,202,060	-				-3.5
2,202,060	-				+0.4
2,202,234	-				-1.2
2,202,289	-				-2.2
2,202,382	+		RR42_RS10285	0.25	+0.3
2,202,382	+		RR42_RS10285	0.25	+0.2
2,202,383	-		RR42_RS10285	0.25	+0.3
2,202,383	-		RR42_RS10285	0.25	-2.6
2,202,579	-		RR42_RS10285	0.60	-1.3
2,202,579	-		RR42_RS10285	0.60	-1.2
2,202,834	+				-1.3
2,202,834	+				+0.5
2,202,835	-				-1.4
2,202,870	-				-0.5
2,203,016	+		RR42_RS10290	0.30	-0.8