Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09095

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,912,663	-		RR42_RS09090	0.16	+0.7
1,912,815	+		RR42_RS09090	0.32	-2.6
1,912,815	+		RR42_RS09090	0.32	-0.2
1,912,816	-		RR42_RS09090	0.32	-1.2
1,912,980	+		RR42_RS09090	0.49	+0.1
1,912,980	+		RR42_RS09090	0.49	-1.1
1,912,981	-		RR42_RS09090	0.49	-0.6
1,912,981	-		RR42_RS09090	0.49	-0.6
1,912,981	-		RR42_RS09090	0.49	+0.9
1,913,038	-		RR42_RS09090	0.55	-0.7
1,913,068	-		RR42_RS09090	0.58	+1.9
1,913,068	-		RR42_RS09090	0.58	-2.4
1,913,136	+		RR42_RS09090	0.65	-0.6
1,913,136	+		RR42_RS09090	0.65	+1.9
1,913,137	-		RR42_RS09090	0.66	-0.3
1,913,137	-		RR42_RS09090	0.66	-0.1
1,913,148	+		RR42_RS09090	0.67	-1.4
1,913,186	+		RR42_RS09090	0.71	+3.8
1,913,779	+		RR42_RS09095	0.12	-1.1
1,913,779	+		RR42_RS09095	0.12	-0.6
1,913,950	-		RR42_RS09095	0.25	-0.8
1,913,950	-		RR42_RS09095	0.25	-0.8
1,913,950	-		RR42_RS09095	0.25	-1.1
1,914,007	-		RR42_RS09095	0.29	-2.1
1,914,341	-		RR42_RS09095	0.54	+0.7
1,914,342	+		RR42_RS09095	0.54	-0.2
1,914,342	+		RR42_RS09095	0.54	+0.1
1,914,342	+		RR42_RS09095	0.54	+1.4
1,914,943	+				-1.3
1,914,943	+				-0.7
1,914,943	+				-0.6
1,914,943	+				-0.3
1,914,944	-				-0.7
1,914,944	-				-0.1
1,914,944	-				-1.5
1,914,944	-				-0.7
1,915,140	+				-0.6
1,915,171	-				-0.5
1,915,171	-				-0.8
1,915,188	-				-2.1
1,915,188	-				-1.4
1,915,188	-				-1.7
1,915,216	+				+0.6
1,915,216	+				+0.2
1,915,216	+				+0.9
1,915,217	-				-2.4
1,915,240	+				+0.9
1,915,241	-				-0.7
1,915,241	-				+0.9
1,915,241	-				-1.4
1,915,276	+				-0.4
1,915,396	+		RR42_RS09100	0.21	-1.1
1,915,473	-		RR42_RS09100	0.33	-1.2
1,915,481	+		RR42_RS09100	0.34	-0.9
1,915,482	-		RR42_RS09100	0.34	+0.7
1,915,598	-		RR42_RS09100	0.53	-0.8
1,915,640	+		RR42_RS09100	0.60	+0.5
1,915,640	+		RR42_RS09100	0.60	-0.9
1,915,641	-		RR42_RS09100	0.60	-1.6
1,915,706	+		RR42_RS09100	0.71	+1.5
1,915,706	+		RR42_RS09100	0.71	-0.8
1,915,706	+		RR42_RS09100	0.71	-0.2
1,915,707	-		RR42_RS09100	0.71	-2.6
1,915,707	-		RR42_RS09100	0.71	-1.7
1,915,707	-		RR42_RS09100	0.71	-2.5
1,915,853	+				-0.9
1,915,854	-				+0.2
1,915,886	+				-0.2
1,915,887	-				-0.8
1,915,887	-				+0.0