Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07505

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,601,667	+		RR42_RS07500	0.48	-2.0
1,601,719	-		RR42_RS07500	0.52	+1.0
1,601,719	-		RR42_RS07500	0.52	-0.2
1,601,735	-		RR42_RS07500	0.53	+0.1
1,601,856	+		RR42_RS07500	0.63	+0.8
1,601,857	-		RR42_RS07500	0.63	-1.2
1,601,911	-		RR42_RS07500	0.68	-0.4
1,601,947	+		RR42_RS07500	0.71	-0.0
1,601,948	-		RR42_RS07500	0.71	-0.8
1,602,008	-		RR42_RS07500	0.75	+0.3
1,602,071	+		RR42_RS07500	0.81	+2.0
1,602,071	+		RR42_RS07500	0.81	+0.5
1,602,071	+		RR42_RS07500	0.81	-0.3
1,602,093	+		RR42_RS07500	0.82	+0.1
1,602,195	+				-0.6
1,602,195	+				+1.6
1,602,195	+				-0.3
1,602,195	+				+0.1
1,602,195	+				+1.0
1,602,196	-				+0.6
1,602,411	+				-0.1
1,602,412	-				-0.7
1,602,472	-				-1.6
1,602,727	-		RR42_RS07505	0.23	-0.7
1,602,813	+		RR42_RS07505	0.29	-0.2
1,602,814	-		RR42_RS07505	0.29	+0.0
1,602,885	+		RR42_RS07505	0.34	-1.3
1,602,886	-		RR42_RS07505	0.34	+1.0
1,602,957	+		RR42_RS07505	0.39	+0.5
1,602,957	+		RR42_RS07505	0.39	+0.1
1,602,958	-		RR42_RS07505	0.40	-0.7
1,602,971	-		RR42_RS07505	0.40	+0.4
1,603,046	-		RR42_RS07505	0.46	+0.7
1,603,341	+		RR42_RS07505	0.66	+0.4
1,603,342	-		RR42_RS07505	0.66	-0.6
1,603,342	-		RR42_RS07505	0.66	+0.8
1,603,404	+		RR42_RS07505	0.71	-1.3
1,603,404	+		RR42_RS07505	0.71	-0.6
1,603,404	+		RR42_RS07505	0.71	+1.0
1,604,005	+				-1.6
1,604,006	-				+0.8
1,604,345	+		RR42_RS07510	0.27	+1.0
1,604,346	-		RR42_RS07510	0.27	+1.1
1,604,566	+		RR42_RS07510	0.40	-0.0
1,604,566	+		RR42_RS07510	0.40	+0.6
1,604,566	+		RR42_RS07510	0.40	-0.3
1,604,567	-		RR42_RS07510	0.40	-1.0
1,604,567	-		RR42_RS07510	0.40	-1.1
1,604,567	-		RR42_RS07510	0.40	+2.3
1,604,740	-		RR42_RS07510	0.50	-1.0