Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07085

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,520,381	+		RR42_RS07080	0.26	-0.1
1,520,440	+		RR42_RS07080	0.35	+0.7
1,520,440	+		RR42_RS07080	0.35	-0.3
1,520,441	-		RR42_RS07080	0.35	+0.3
1,520,441	-		RR42_RS07080	0.35	-2.5
1,520,441	-		RR42_RS07080	0.35	-0.6
1,520,441	-		RR42_RS07080	0.35	-1.8
1,520,441	-		RR42_RS07080	0.35	+1.2
1,520,441	-		RR42_RS07080	0.35	-0.1
1,520,477	+		RR42_RS07080	0.40	+0.3
1,520,531	+		RR42_RS07080	0.47	-1.6
1,520,532	-		RR42_RS07080	0.48	+0.0
1,520,532	-		RR42_RS07080	0.48	+1.1
1,520,663	+		RR42_RS07080	0.66	-1.2
1,520,724	-		RR42_RS07080	0.75	-0.5
1,520,784	-		RR42_RS07080	0.83	+0.4
1,520,791	+		RR42_RS07080	0.84	+0.8
1,520,791	+		RR42_RS07080	0.84	-1.6
1,520,792	-		RR42_RS07080	0.84	+1.8
1,520,795	+		RR42_RS07080	0.85	-0.5
1,520,795	+		RR42_RS07080	0.85	-0.8
1,520,796	-		RR42_RS07080	0.85	+1.2
1,520,848	+				-2.6
1,520,900	+				-1.3
1,520,901	-				+1.5
1,520,901	-				+1.5
1,520,952	+				+0.1
1,520,953	-				-0.2
1,520,953	-				-1.2
1,521,124	-				-1.3
1,521,124	-				-1.3
1,521,169	+				+0.5
1,521,169	+				-0.9
1,521,170	-				+1.5
1,521,204	+				-0.5
1,521,204	+				-0.5
1,521,204	+				-0.7
1,521,479	-		RR42_RS07085	0.12	-1.6
1,521,620	-		RR42_RS07085	0.20	+1.1
1,521,814	+		RR42_RS07085	0.30	+0.1
1,521,814	+		RR42_RS07085	0.30	-2.3
1,521,981	+		RR42_RS07085	0.39	-0.2
1,522,004	+		RR42_RS07085	0.40	+0.4
1,522,004	+		RR42_RS07085	0.40	+1.2
1,522,004	+		RR42_RS07085	0.40	-3.3
1,522,005	-		RR42_RS07085	0.40	+0.1
1,522,007	-		RR42_RS07085	0.40	+0.5
1,522,007	-		RR42_RS07085	0.40	-0.4
1,522,060	+		RR42_RS07085	0.43	+1.9
1,522,267	+		RR42_RS07085	0.54	-2.1
1,522,284	+		RR42_RS07085	0.55	-0.4
1,522,285	-		RR42_RS07085	0.55	+0.1
1,522,300	+		RR42_RS07085	0.56	+0.9
1,522,300	+		RR42_RS07085	0.56	-0.3
1,522,301	-		RR42_RS07085	0.56	+0.5
1,522,334	-		RR42_RS07085	0.58	+0.1
1,522,790	+		RR42_RS07085	0.82	-1.3
1,522,845	-		RR42_RS07085	0.85	+0.1
1,522,916	-		RR42_RS07085	0.89	+0.3
1,523,119	+				+0.2
1,523,155	-				-1.1
1,523,356	+		RR42_RS07090	0.51	-0.7
1,523,386	+		RR42_RS07090	0.58	-0.0
1,523,522	+				-3.9
1,523,522	+				+0.2
1,523,522	+				+0.3
1,523,614	+				-1.8
1,523,614	+				+0.2
1,523,615	-				+0.5
1,523,628	-				-0.5
1,523,645	+				-0.7
1,523,707	+				-2.3
1,523,707	+				+0.3
1,523,732	+				-1.3
1,523,744	+				-0.2
1,523,745	-				+1.1
1,523,745	-				-0.0
1,523,746	+				+1.0
1,523,783	+				-1.0
1,523,798	+				+0.6
1,523,798	+				-0.9
1,523,799	-				-0.1
1,523,988	+		RR42_RS07095	0.46	-1.2
1,523,989	-		RR42_RS07095	0.46	-0.6
1,523,989	-		RR42_RS07095	0.46	-0.0
1,523,989	-		RR42_RS07095	0.46	-0.9
1,524,002	-		RR42_RS07095	0.49	+1.1
1,524,026	-		RR42_RS07095	0.54	+0.4
1,524,026	-		RR42_RS07095	0.54	-1.3
1,524,026	-		RR42_RS07095	0.54	+1.6
1,524,086	+		RR42_RS07095	0.66	+0.2
1,524,087	-		RR42_RS07095	0.66	-0.7