Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06445

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,409,736	+		RR42_RS06435	0.83	-1.8
1,409,736	+		RR42_RS06435	0.83	+1.6
1,409,854	+				+0.6
1,409,879	-				+0.8
1,410,105	+		RR42_RS06440	0.12	+0.0
1,410,105	+		RR42_RS06440	0.12	-2.6
1,410,106	-		RR42_RS06440	0.13	+0.6
1,410,117	+		RR42_RS06440	0.15	+0.1
1,410,261	+		RR42_RS06440	0.54	+0.8
1,410,681	-		RR42_RS06445	0.29	+2.1
1,410,845	+		RR42_RS06445	0.56	-0.1
1,410,846	-		RR42_RS06445	0.56	+0.1
1,410,846	-		RR42_RS06445	0.56	+0.1
1,411,085	+				+1.4
1,411,086	-				-0.7
1,411,086	-				+1.2
1,411,086	-				+0.8
1,411,086	-				-0.5
1,411,086	-				-0.8
1,411,089	-				-0.7
1,411,089	-				-0.9
1,411,089	-				+2.5
1,411,097	-				+0.9
1,411,219	+				+0.3
1,411,219	+				+1.1
1,411,219	+				-0.8
1,411,219	+				-0.4
1,411,220	-				+1.0
1,411,222	+				+1.2
1,411,223	-				-0.2
1,411,224	+				-0.1
1,411,224	+				+0.1
1,411,224	+				+0.1
1,411,321	+				+0.2
1,411,529	+		RR42_RS06450	0.19	-1.4
1,411,530	-		RR42_RS06450	0.19	+1.6
1,411,545	+		RR42_RS06450	0.20	+1.1
1,411,546	-		RR42_RS06450	0.20	+0.2
1,411,546	-		RR42_RS06450	0.20	+0.6
1,411,788	+		RR42_RS06450	0.38	+1.1
1,411,789	-		RR42_RS06450	0.38	+0.8
1,411,872	+		RR42_RS06450	0.44	+1.7
1,411,873	-		RR42_RS06450	0.44	-1.7
1,411,995	+		RR42_RS06450	0.53	-1.1
1,411,995	+		RR42_RS06450	0.53	+0.9
1,411,995	+		RR42_RS06450	0.53	+1.1
1,411,996	-		RR42_RS06450	0.53	+0.6
1,411,996	-		RR42_RS06450	0.53	-0.8
1,412,008	-		RR42_RS06450	0.54	+1.6
1,412,049	+		RR42_RS06450	0.57	+1.6
1,412,049	+		RR42_RS06450	0.57	-0.6