Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06000

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,319,431	-		RR42_RS05995	0.60	+0.1
1,319,431	-		RR42_RS05995	0.60	-0.0
1,319,676	-		RR42_RS05995	0.71	+1.1
1,320,033	+		RR42_RS05995	0.88	-0.8
1,320,033	+		RR42_RS05995	0.88	-0.8
1,320,034	-		RR42_RS05995	0.88	-0.1
1,320,034	-		RR42_RS05995	0.88	-1.3
1,320,095	+				-3.3
1,320,095	+				-1.4
1,320,096	-				-1.0
1,320,096	-				+0.3
1,320,096	-				-1.4
1,320,344	+				-0.1
1,320,345	-				+0.1
1,320,345	-				-0.9
1,320,473	+		RR42_RS06000	0.30	-2.2
1,320,474	-		RR42_RS06000	0.31	-0.4
1,321,040	-				-1.0
1,321,096	-				+0.1
1,321,254	-				+0.1
1,321,284	+				-2.7
1,321,284	+				-0.3
1,321,284	+				+0.9
1,321,284	+				-3.2
1,321,285	-				+0.7
1,321,285	-				+2.5
1,321,285	-				-2.0
1,321,382	+		RR42_RS06010	0.28	-1.3
1,321,383	-		RR42_RS06010	0.28	-0.1
1,321,383	-		RR42_RS06010	0.28	+0.3
1,321,383	-		RR42_RS06010	0.28	+0.0
1,321,440	-		RR42_RS06010	0.40	-0.2
1,321,628	+		RR42_RS06010	0.78	+1.5
1,321,632	-		RR42_RS06010	0.79	+0.1
1,321,667	+		RR42_RS06010	0.86	-2.3
1,321,667	+		RR42_RS06010	0.86	-1.9
1,321,668	-		RR42_RS06010	0.86	-1.5
1,321,668	-		RR42_RS06010	0.86	+0.5
1,321,668	-		RR42_RS06010	0.86	+0.8