Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05690

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,250,786	+				+0.7
1,250,988	+				-0.5
1,250,989	-				-1.1
1,251,075	+		RR42_RS05685	0.10	+0.1
1,251,205	-		RR42_RS05685	0.29	+0.0
1,251,463	-		RR42_RS05685	0.66	+0.6
1,251,463	-		RR42_RS05685	0.66	+0.5
1,251,672	+				+0.1
1,251,673	-				+0.6
1,251,762	-				+2.3
1,251,762	-				+0.2
1,251,821	+		RR42_RS05690	0.12	-0.3
1,251,821	+		RR42_RS05690	0.12	-0.6
1,251,821	+		RR42_RS05690	0.12	+0.1
1,251,862	-		RR42_RS05690	0.18	-1.0
1,251,887	+		RR42_RS05690	0.22	-1.1
1,251,891	+		RR42_RS05690	0.23	-2.9
1,251,892	-		RR42_RS05690	0.23	-0.5
1,251,892	-		RR42_RS05690	0.23	-1.4
1,251,892	-		RR42_RS05690	0.23	-0.9
1,252,128	+		RR42_RS05690	0.60	+0.0
1,252,129	-		RR42_RS05690	0.61	+1.2
1,252,129	-		RR42_RS05690	0.61	-0.8
1,252,129	-		RR42_RS05690	0.61	-1.8
1,252,230	+		RR42_RS05690	0.77	+0.7
1,252,230	+		RR42_RS05690	0.77	+0.2
1,252,230	+		RR42_RS05690	0.77	-2.3
1,252,231	-		RR42_RS05690	0.77	+0.8
1,252,495	+				-1.2
1,252,670	-				-1.1
1,253,084	-		RR42_RS05695	0.29	-1.6
1,253,264	-		RR42_RS05695	0.47	-1.4
1,253,264	-		RR42_RS05695	0.47	-0.6