Experiment: Vogels_fungal_media; pH 5.5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02705 and HSERO_RS02710 are separated by 28 nucleotides HSERO_RS02710 and HSERO_RS02715 are separated by 329 nucleotides
HSERO_RS02705: HSERO_RS02705 - FAD-dependent oxidoreductase, at 597,730 to 599,499
_RS02705
HSERO_RS02710: HSERO_RS02710 - Zn-dependent hydrolase, at 599,528 to 600,487
_RS02710
HSERO_RS02715: HSERO_RS02715 - IclR family transcriptional regulator, at 600,817 to 601,590
_RS02715
Position (kb) 599
600
601 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 598.626 kb on - strand, within HSERO_RS02705 at 598.779 kb on - strand, within HSERO_RS02705 at 598.883 kb on - strand, within HSERO_RS02705 at 599.100 kb on - strand, within HSERO_RS02705 at 599.172 kb on - strand, within HSERO_RS02705 at 599.193 kb on - strand, within HSERO_RS02705 at 599.224 kb on - strand, within HSERO_RS02705 at 599.282 kb on - strand, within HSERO_RS02705 at 599.595 kb on + strand at 599.618 kb on + strand at 599.818 kb on + strand, within HSERO_RS02710 at 599.863 kb on + strand at 599.893 kb on + strand, within HSERO_RS02710 at 599.987 kb on + strand, within HSERO_RS02710 at 599.997 kb on + strand, within HSERO_RS02710 at 600.002 kb on + strand, within HSERO_RS02710 at 600.074 kb on + strand, within HSERO_RS02710 at 600.082 kb on - strand, within HSERO_RS02710 at 600.311 kb on + strand, within HSERO_RS02710 at 600.319 kb on - strand, within HSERO_RS02710 at 600.357 kb on - strand, within HSERO_RS02710 at 600.443 kb on - strand at 600.582 kb on + strand at 600.582 kb on + strand at 600.617 kb on + strand at 600.728 kb on + strand at 600.745 kb on - strand at 601.023 kb on + strand, within HSERO_RS02715 at 601.131 kb on + strand, within HSERO_RS02715 at 601.232 kb on + strand, within HSERO_RS02715
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media; pH 5.5 remove 598,626 - HSERO_RS02705 0.51 +0.7 598,779 - HSERO_RS02705 0.59 -0.1 598,883 - HSERO_RS02705 0.65 +1.2 599,100 - HSERO_RS02705 0.77 +0.4 599,172 - HSERO_RS02705 0.81 -0.2 599,193 - HSERO_RS02705 0.83 +0.3 599,224 - HSERO_RS02705 0.84 +0.1 599,282 - HSERO_RS02705 0.88 +3.9 599,595 + +0.2 599,618 + +1.9 599,818 + HSERO_RS02710 0.30 -0.8 599,863 + +1.9 599,893 + HSERO_RS02710 0.38 -0.1 599,987 + HSERO_RS02710 0.48 -0.2 599,997 + HSERO_RS02710 0.49 +1.5 600,002 + HSERO_RS02710 0.49 -0.2 600,074 + HSERO_RS02710 0.57 -1.0 600,082 - HSERO_RS02710 0.58 +0.0 600,311 + HSERO_RS02710 0.82 +0.0 600,319 - HSERO_RS02710 0.82 -2.9 600,357 - HSERO_RS02710 0.86 +0.1 600,443 - +1.5 600,582 + +1.0 600,582 + -0.3 600,617 + +0.3 600,728 + -1.0 600,745 - +0.8 601,023 + HSERO_RS02715 0.27 -1.0 601,131 + HSERO_RS02715 0.41 -0.3 601,232 + HSERO_RS02715 0.54 -0.9
Or see this region's nucleotide sequence