Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_09950

Experiment: 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine
2,247,346	+				+1.3
2,247,347	-				+0.3
2,247,354	-				+0.1
2,247,362	-				+0.3
2,247,379	+				-0.1
2,247,380	-				+0.3
2,247,380	-				+1.8
2,247,380	-				-0.0
2,247,380	-				+0.1
2,247,382	-				+0.0
2,247,382	-				-0.1
2,247,440	-				+0.8
2,247,440	-				+0.2
2,247,440	-				-1.5
2,247,478	+				+0.0
2,247,478	+				-0.3
2,247,479	-				-0.1
2,247,479	-				+0.9
2,247,479	-				+0.0
2,247,479	-				-0.2
2,247,479	-				-1.2
2,247,479	-				-0.3
2,247,536	+				+1.1
2,247,545	+				-0.1
2,247,558	+				-0.4
2,247,558	+				+0.8
2,247,558	+				+0.2
2,247,559	-				+0.8
2,247,559	-				-0.3
2,247,562	+				-0.1
2,247,563	-				+0.2
2,247,563	-				+0.0
2,247,568	+				-0.1
2,247,568	+				+0.5
2,247,572	+				-1.0
2,247,573	-				-0.1
2,247,648	+				-0.7
2,247,684	+				+0.3
2,247,684	+				-1.0
2,247,685	-				-0.4
2,247,706	+				-0.5
2,247,856	+				+0.5
2,247,856	+				+0.1
2,247,856	+				+0.8
2,247,856	+				+1.9
2,247,856	+				+0.1
2,247,856	+				-0.0
2,247,857	-				-0.4
2,247,857	-				-0.5
2,247,857	-				+0.3
2,247,857	-				+0.7
2,247,877	+				-0.1
2,247,877	+				+0.5
2,247,877	+				+0.4
2,247,877	+				+0.7
2,247,877	+				+0.0
2,247,877	+				+0.6
2,247,878	-				+0.9
2,247,878	-				+0.6
2,247,878	-				+1.1
2,247,878	-				-1.6
2,247,878	-				-0.2
2,247,878	-				-0.7
2,247,878	-				-0.4
2,247,878	-				-0.5
2,247,878	-				-0.4
2,247,878	-				-0.0
2,247,878	-				+1.2
2,247,878	-				-1.5
2,247,962	+		AO356_09945	0.26	+0.1
2,247,963	-		AO356_09945	0.26	+0.0
2,248,041	+		AO356_09945	0.43	-0.8
2,248,170	+		AO356_09945	0.70	+0.3
2,248,197	+		AO356_09945	0.76	+0.7
2,248,197	+		AO356_09945	0.76	+0.1
2,248,197	+		AO356_09945	0.76	+0.0
2,248,197	+		AO356_09945	0.76	-0.5
2,248,198	-		AO356_09945	0.76	+0.2
2,248,271	+				+0.6
2,248,271	+				+0.3
2,248,271	+				-0.7
2,248,271	+				-0.1
2,248,271	+				-0.1
2,248,272	-				-0.3
2,248,272	-				+0.9
2,248,272	-				+0.5
2,248,272	-				+0.3
2,248,272	-				-0.7
2,248,272	-				-0.2
2,248,272	-				+0.2
2,248,312	+				-0.9
2,248,418	+				+0.1
2,248,418	+				-1.1
2,248,419	-				+0.3
2,248,419	-				-0.1
2,248,419	-				-1.1
2,248,499	+		AO356_09950	0.19	-1.1
2,248,499	+		AO356_09950	0.19	+0.9
2,248,499	+		AO356_09950	0.19	+1.8
2,248,499	+		AO356_09950	0.19	-1.1
2,248,500	-		AO356_09950	0.19	-0.8
2,248,500	-		AO356_09950	0.19	+0.6
2,248,500	-		AO356_09950	0.19	+0.9
2,248,500	-		AO356_09950	0.19	-0.1
2,248,540	+		AO356_09950	0.23	-0.9
2,248,540	+		AO356_09950	0.23	+0.9
2,248,540	+		AO356_09950	0.23	+2.3
2,248,540	+		AO356_09950	0.23	+1.1
2,248,540	+		AO356_09950	0.23	-0.4
2,248,541	-		AO356_09950	0.23	-0.4
2,248,541	-		AO356_09950	0.23	-1.5
2,248,541	-		AO356_09950	0.23	-0.5
2,248,541	-		AO356_09950	0.23	-0.1
2,248,544	+		AO356_09950	0.24	-1.2
2,248,544	+		AO356_09950	0.24	+0.4
2,248,544	+		AO356_09950	0.24	-0.0
2,248,545	-		AO356_09950	0.24	-0.1
2,248,545	-		AO356_09950	0.24	+0.8
2,248,552	+		AO356_09950	0.25	-0.0
2,248,552	+		AO356_09950	0.25	+0.3
2,248,553	-		AO356_09950	0.25	-0.5
2,248,553	-		AO356_09950	0.25	+0.1
2,248,643	+		AO356_09950	0.36	+0.1
2,248,643	+		AO356_09950	0.36	+1.7
2,248,643	+		AO356_09950	0.36	+2.0
2,248,644	-		AO356_09950	0.36	+0.6
2,248,840	+		AO356_09950	0.59	-0.1
2,248,869	+		AO356_09950	0.62	+1.9
2,248,870	-		AO356_09950	0.63	+0.5
2,248,942	+		AO356_09950	0.71	-0.1
2,248,942	+		AO356_09950	0.71	-0.9
2,248,942	+		AO356_09950	0.71	+0.9
2,248,942	+		AO356_09950	0.71	-1.0
2,248,943	-		AO356_09950	0.71	-0.0
2,248,984	-		AO356_09950	0.76	+0.5
2,248,993	+		AO356_09950	0.77	-0.2
2,248,993	+		AO356_09950	0.77	+0.3
2,248,993	+		AO356_09950	0.77	-1.0
2,248,994	-		AO356_09950	0.77	+0.1
2,249,024	+		AO356_09950	0.81	+1.0
2,249,024	+		AO356_09950	0.81	+0.5
2,249,024	+		AO356_09950	0.81	+0.2
2,249,024	+		AO356_09950	0.81	-0.2
2,249,024	+		AO356_09950	0.81	-0.1
2,249,025	-		AO356_09950	0.81	-0.0
2,249,025	-		AO356_09950	0.81	-0.4
2,249,025	-		AO356_09950	0.81	+0.3
2,249,025	-		AO356_09950	0.81	+1.9
2,249,025	-		AO356_09950	0.81	+0.8
2,249,055	+		AO356_09950	0.84	+0.3
2,249,055	+		AO356_09950	0.84	+0.6
2,249,055	+		AO356_09950	0.84	+0.4
2,249,055	+		AO356_09950	0.84	-2.0
2,249,055	+		AO356_09950	0.84	-0.2
2,249,055	+		AO356_09950	0.84	-0.3
2,249,055	+		AO356_09950	0.84	-0.1
2,249,055	+		AO356_09950	0.84	+1.0
2,249,055	+		AO356_09950	0.84	-0.9
2,249,055	+		AO356_09950	0.84	-0.4
2,249,055	+		AO356_09950	0.84	-0.4
2,249,055	+		AO356_09950	0.84	+0.2
2,249,055	+		AO356_09950	0.84	+0.3
2,249,056	-		AO356_09950	0.85	-0.5
2,249,056	-		AO356_09950	0.85	-0.7
2,249,056	-		AO356_09950	0.85	+0.7
2,249,056	-		AO356_09950	0.85	+0.3
2,249,056	-		AO356_09950	0.85	+0.2
2,249,056	-		AO356_09950	0.85	+0.1
2,249,056	-		AO356_09950	0.85	+0.1
2,249,056	-		AO356_09950	0.85	+1.6
2,249,056	-		AO356_09950	0.85	+0.1
2,249,064	+		AO356_09950	0.86	+0.3
2,249,064	+		AO356_09950	0.86	+0.7
2,249,064	+		AO356_09950	0.86	+0.2
2,249,064	+		AO356_09950	0.86	+0.9
2,249,064	+		AO356_09950	0.86	-0.2
2,249,064	+		AO356_09950	0.86	+0.3
2,249,065	-		AO356_09950	0.86	+1.5
2,249,065	-		AO356_09950	0.86	-0.0
2,249,065	-		AO356_09950	0.86	-0.3
2,249,065	-		AO356_09950	0.86	+0.1
2,249,065	-		AO356_09950	0.86	+0.9
2,249,163	+				-0.8
2,249,163	+				+1.7
2,249,163	+				+2.2
2,249,213	-				+0.1
2,249,220	+				+0.3
2,249,220	+				-0.2
2,249,220	+				+1.8
2,249,220	+				-0.1
2,249,220	+				+0.0
2,249,220	+				-0.1
2,249,220	+				+0.6
2,249,220	+				-0.2
2,249,220	+				+0.9
2,249,220	+				-0.0
2,249,220	+				-0.5
2,249,220	+				+0.2
2,249,220	+				+0.2
2,249,220	+				+0.3
2,249,221	-				+1.3
2,249,221	-				-0.2
2,249,221	-				+0.2
2,249,221	-				-1.2
2,249,221	-				+1.6
2,249,221	-				+0.5
2,249,221	-				-0.1
2,249,314	-		AO356_09955	0.17	-2.2
2,249,314	-		AO356_09955	0.17	+0.0
2,249,344	+		AO356_09955	0.22	+0.3
2,249,344	+		AO356_09955	0.22	-1.0
2,249,344	+		AO356_09955	0.22	+0.2
2,249,344	+		AO356_09955	0.22	+0.3
2,249,344	+		AO356_09955	0.22	+1.1
2,249,345	-		AO356_09955	0.22	-0.3
2,249,345	-		AO356_09955	0.22	+0.1
2,249,345	-		AO356_09955	0.22	-0.2
2,249,345	-		AO356_09955	0.22	+0.1
2,249,345	-		AO356_09955	0.22	-0.5
2,249,345	-		AO356_09955	0.22	-1.0
2,249,567	+		AO356_09955	0.58	-0.1
2,249,567	+		AO356_09955	0.58	-0.2
2,249,567	+		AO356_09955	0.58	+0.1
2,249,567	+		AO356_09955	0.58	+0.8
2,249,567	+		AO356_09955	0.58	+0.1
2,249,568	-		AO356_09955	0.58	+0.5
2,249,568	-		AO356_09955	0.58	+0.5
2,249,568	-		AO356_09955	0.58	+0.1
2,249,568	-		AO356_09955	0.58	+1.5
2,249,590	+		AO356_09955	0.61	-0.4
2,249,591	-		AO356_09955	0.61	+0.8
2,249,640	+		AO356_09955	0.69	-0.6
2,249,717	+		AO356_09955	0.82	+1.1
2,249,718	-		AO356_09955	0.82	-0.8
2,249,718	-		AO356_09955	0.82	-0.2
2,249,752	+		AO356_09955	0.88	+0.3
2,249,752	+		AO356_09955	0.88	+0.9
2,249,850	+				+1.5
2,249,850	+				+0.1
2,249,850	+				+0.3
2,249,850	+				-0.1
2,249,850	+				+0.1
2,249,850	+				+0.3
2,249,850	+				+0.3
2,249,851	-				-0.2
2,249,851	-				+0.2
2,249,851	-				+0.8
2,249,851	-				+0.8
2,249,851	-				-0.3
2,249,851	-				-1.8
2,249,851	-				+1.3
2,249,851	-				+0.2
2,249,851	-				+0.2
2,249,851	-				-0.8
2,249,851	-				-0.7
2,249,851	-				+0.0
2,249,987	+				+0.3
2,249,991	+				+0.6
2,250,146	+		AO356_09960	0.30	+1.1
2,250,146	+		AO356_09960	0.30	-0.2
2,250,146	+		AO356_09960	0.30	+0.8
2,250,146	+		AO356_09960	0.30	-0.1
2,250,147	-		AO356_09960	0.30	+0.4
2,250,147	-		AO356_09960	0.30	-0.1
2,250,147	-		AO356_09960	0.30	-0.7
2,250,147	-		AO356_09960	0.30	+0.1
2,250,147	-		AO356_09960	0.30	+0.1
2,250,147	-		AO356_09960	0.30	-0.3
2,250,147	-		AO356_09960	0.30	-0.4