Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1259

Experiment: BG11 with Chloride 62.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Chloride 62.5 mM
1,281,004	+		Synpcc7942_1257	0.71	-0.0
1,281,018	+		Synpcc7942_1257	0.72	+0.1
1,281,026	-		Synpcc7942_1257	0.73	-0.9
1,281,026	-		Synpcc7942_1257	0.73	-1.5
1,281,026	-		Synpcc7942_1257	0.73	-1.4
1,281,040	-		Synpcc7942_1257	0.73	-2.8
1,281,081	+		Synpcc7942_1257	0.76	-4.3
1,281,175	-		Synpcc7942_1257	0.81	-2.1
1,281,199	+		Synpcc7942_1257	0.82	-0.0
1,281,225	+		Synpcc7942_1257	0.83	-1.5
1,281,227	+		Synpcc7942_1257	0.83	+0.2
1,281,238	+		Synpcc7942_1257	0.84	+0.3
1,281,243	+		Synpcc7942_1257	0.84	-1.4
1,281,255	-		Synpcc7942_1257	0.85	-0.4
1,281,271	-		Synpcc7942_1257	0.86	-2.2
1,281,312	+		Synpcc7942_1257	0.88	+0.5
1,281,387	+				-1.0
1,281,410	+				-0.2
1,281,410	+				+0.2
1,281,410	+				-0.9
1,281,435	+				+1.1
1,281,443	-				+0.5
1,281,447	+				-1.3
1,281,455	-				-0.6
1,281,455	-				+0.1
1,281,455	-				-2.5
1,281,469	+				-1.5
1,281,471	+				-0.3
1,281,471	+				-0.0
1,281,485	+				+0.3
1,281,521	+				-0.0
1,281,710	+				+0.1
1,281,718	-		Synpcc7942_1258	0.45	-2.3
1,281,750	-		Synpcc7942_1258	0.53	-0.3
1,281,774	+		Synpcc7942_1258	0.58	-1.0
1,281,774	+		Synpcc7942_1258	0.58	-0.1
1,281,782	-		Synpcc7942_1258	0.60	-2.6
1,281,782	-		Synpcc7942_1258	0.60	-1.9
1,281,782	-		Synpcc7942_1258	0.60	+0.4
1,281,782	-		Synpcc7942_1258	0.60	-3.5
1,281,785	+		Synpcc7942_1258	0.61	+0.5
1,281,793	-		Synpcc7942_1258	0.63	-1.3
1,281,821	+		Synpcc7942_1258	0.70	+0.1
1,281,830	+		Synpcc7942_1258	0.72	-0.6
1,281,831	+		Synpcc7942_1258	0.72	-1.2
1,281,842	+		Synpcc7942_1258	0.75	-1.6
1,281,845	-		Synpcc7942_1258	0.76	-1.0
1,281,906	-				-1.2
1,281,970	+				-1.1
1,281,978	-				-0.3
1,281,983	-				-0.4
1,281,988	-				-0.2
1,281,988	-				-0.4
1,281,989	-				+0.2
1,281,997	-				+1.0
1,282,056	+				-0.9
1,282,064	-				-1.0
1,282,066	+				+2.0
1,282,074	-				-3.6
1,282,074	-				-2.5
1,282,087	-				-0.5
1,282,147	+		Synpcc7942_1259	0.13	-0.2
1,282,147	+		Synpcc7942_1259	0.13	-1.3
1,282,155	-		Synpcc7942_1259	0.14	+1.9
1,282,155	-		Synpcc7942_1259	0.14	-0.7
1,282,171	-		Synpcc7942_1259	0.15	-3.3
1,282,171	-		Synpcc7942_1259	0.15	+1.7
1,282,171	-		Synpcc7942_1259	0.15	+0.5
1,282,173	+		Synpcc7942_1259	0.15	-0.2
1,282,175	+		Synpcc7942_1259	0.15	-0.3
1,282,216	-		Synpcc7942_1259	0.19	-0.7
1,282,330	-		Synpcc7942_1259	0.29	-0.9
1,282,330	-		Synpcc7942_1259	0.29	-2.6
1,282,404	+		Synpcc7942_1259	0.35	-0.8
1,282,412	-		Synpcc7942_1259	0.36	+0.9
1,282,431	+		Synpcc7942_1259	0.37	-0.5
1,282,462	-		Synpcc7942_1259	0.40	-0.5
1,282,465	-		Synpcc7942_1259	0.40	-1.0
1,282,485	-		Synpcc7942_1259	0.42	+0.3
1,282,493	-		Synpcc7942_1259	0.42	-1.9
1,282,495	-		Synpcc7942_1259	0.43	+0.1
1,282,562	+		Synpcc7942_1259	0.48	-0.7
1,282,569	-		Synpcc7942_1259	0.49	+1.1
1,282,584	-		Synpcc7942_1259	0.50	-1.5
1,282,601	+		Synpcc7942_1259	0.52	-2.0
1,282,611	+		Synpcc7942_1259	0.52	+0.3
1,282,685	+		Synpcc7942_1259	0.59	-0.7
1,282,700	+		Synpcc7942_1259	0.60	-2.7
1,282,706	+		Synpcc7942_1259	0.60	-2.1
1,282,708	-		Synpcc7942_1259	0.61	-1.4
1,282,724	-		Synpcc7942_1259	0.62	-0.9
1,282,861	-		Synpcc7942_1259	0.74	+0.5
1,282,903	+		Synpcc7942_1259	0.77	-0.8
1,283,061	-				-1.0
1,283,088	-				-1.5
1,283,088	-				-0.7
1,283,099	-				+1.1
1,283,124	-				-1.6
1,283,152	-				-0.7
1,283,212	+				+0.7
1,283,225	-				-0.1
1,283,238	-				-2.0
1,283,248	-				+0.7
1,283,255	-				+0.4
1,283,288	-				-1.1
1,283,299	+				-0.6
1,283,304	+				+0.1
1,283,312	-				-0.9
1,283,312	-				+0.3
1,283,314	+				-1.4
1,283,317	-				+0.6
1,283,317	-				+2.1
1,283,317	-				+0.9
1,283,321	-				+1.3
1,283,342	-		Synpcc7942_1260	0.12	-0.6
1,283,347	+		Synpcc7942_1260	0.12	-0.4
1,283,360	+		Synpcc7942_1260	0.14	+0.3
1,283,389	+		Synpcc7942_1260	0.18	-0.1
1,283,392	-		Synpcc7942_1260	0.18	+0.9
1,283,427	-		Synpcc7942_1260	0.22	-1.1
1,283,504	-		Synpcc7942_1260	0.31	-2.9
1,283,532	-		Synpcc7942_1260	0.35	-0.9
1,283,553	+		Synpcc7942_1260	0.37	+0.0
1,283,588	+		Synpcc7942_1260	0.42	-1.2
1,283,598	+		Synpcc7942_1260	0.43	-0.1
1,283,606	-		Synpcc7942_1260	0.44	+0.0
1,283,608	+		Synpcc7942_1260	0.44	+0.5
1,283,608	+		Synpcc7942_1260	0.44	+1.5
1,283,697	+		Synpcc7942_1260	0.55	-1.4
1,283,714	+		Synpcc7942_1260	0.57	-3.1
1,283,714	+		Synpcc7942_1260	0.57	+0.4
1,283,722	-		Synpcc7942_1260	0.58	+0.1
1,283,748	+		Synpcc7942_1260	0.61	-2.1
1,283,775	-		Synpcc7942_1260	0.64	+0.8
1,283,790	+		Synpcc7942_1260	0.66	+0.0
1,283,790	+		Synpcc7942_1260	0.66	-0.4
1,283,790	+		Synpcc7942_1260	0.66	-0.9
1,283,790	+		Synpcc7942_1260	0.66	+1.2
1,283,798	-		Synpcc7942_1260	0.67	-1.2
1,283,830	-		Synpcc7942_1260	0.71	-0.3
1,283,830	-		Synpcc7942_1260	0.71	+2.0
1,283,836	+		Synpcc7942_1260	0.71	-0.4
1,283,836	+		Synpcc7942_1260	0.71	-1.9
1,283,844	-		Synpcc7942_1260	0.72	+0.8
1,283,865	+		Synpcc7942_1260	0.75	-0.1
1,283,888	-		Synpcc7942_1260	0.78	-1.6
1,283,888	-		Synpcc7942_1260	0.78	-2.3
1,283,925	+		Synpcc7942_1260	0.82	-1.8
1,283,931	+		Synpcc7942_1260	0.83	+0.3
1,283,934	-		Synpcc7942_1260	0.83	+0.2
1,283,944	-		Synpcc7942_1260	0.85	-0.3
1,283,944	-				+0.5
1,283,972	+		Synpcc7942_1260	0.88	-0.7
1,283,972	+		Synpcc7942_1260	0.88	-0.6
1,283,972	+		Synpcc7942_1260	0.88	+0.4
1,283,980	-		Synpcc7942_1260	0.89	-0.4
1,283,980	-		Synpcc7942_1260	0.89	-0.6
1,283,980	-		Synpcc7942_1260	0.89	-0.1
1,283,980	-		Synpcc7942_1260	0.89	+0.1
1,283,980	-		Synpcc7942_1260	0.89	-0.3
1,283,987	+		Synpcc7942_1260	0.90	-0.7
1,284,027	-				+0.7
1,284,082	+				-0.1
1,284,108	-				-1.0
1,284,142	-				-0.2
1,284,142	-				+0.7
1,284,150	+				-0.2
1,284,151	-				+0.2