Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS19050

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
4,368,146	-		HSERO_RS19045	0.73	-1.4
4,368,162	+		HSERO_RS19045	0.74	-0.5
4,368,170	-		HSERO_RS19045	0.74	+0.3
4,368,194	-		HSERO_RS19045	0.75	-1.0
4,368,194	-		HSERO_RS19045	0.75	-1.2
4,368,222	+		HSERO_RS19045	0.76	-0.5
4,368,312	-		HSERO_RS19045	0.80	+0.3
4,368,402	+		HSERO_RS19045	0.83	+0.6
4,368,462	+		HSERO_RS19045	0.86	-0.8
4,368,480	+		HSERO_RS19045	0.87	-0.3
4,368,529	-		HSERO_RS19045	0.89	-0.3
4,368,597	+				+0.1
4,368,597	+				-0.0
4,368,688	-				+0.1
4,368,693	-				+0.3
4,368,768	+				-0.0
4,368,868	-				+0.5
4,368,962	-				-0.6
4,368,976	-				-0.0
4,369,147	-				+0.8
4,369,238	+		HSERO_RS19050	0.19	+0.3
4,369,312	+		HSERO_RS19050	0.28	-0.3
4,369,500	+		HSERO_RS19050	0.52	-1.4
4,369,655	+		HSERO_RS19050	0.71	-1.0
4,369,663	-		HSERO_RS19050	0.72	-0.4
4,369,675	-		HSERO_RS19050	0.73	+1.5
4,369,687	+		HSERO_RS19050	0.75	-0.4
4,369,789	+		HSERO_RS19050	0.88	-0.2
4,369,996	-		HSERO_RS19055	0.13	-1.0
4,370,068	-		HSERO_RS19055	0.22	+0.4
4,370,084	+		HSERO_RS19055	0.24	-0.3
4,370,120	+		HSERO_RS19055	0.29	-3.6
4,370,326	+		HSERO_RS19055	0.56	+0.0
4,370,334	-		HSERO_RS19055	0.57	-0.2
4,370,491	-		HSERO_RS19055	0.77	-0.3
4,370,576	-		HSERO_RS19055	0.88	+0.5
4,370,702	+				+0.0
4,370,702	+				-0.0
4,370,710	-				-1.3
4,370,783	+				-1.0
4,370,783	+				+0.9
4,370,866	-				-2.7