Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35610

Experiment: D-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (N)
3,733,581	-		PGA1_c35600	0.50	-0.5
3,733,581	-		PGA1_c35600	0.50	+1.5
3,733,629	+		PGA1_c35600	0.54	+0.3
3,733,705	-		PGA1_c35600	0.61	+0.9
3,733,715	-		PGA1_c35600	0.62	+2.0
3,733,962	-		PGA1_c35600	0.84	+0.7
3,734,137	+				+0.8
3,734,142	+				-0.1
3,734,142	+				-0.2
3,734,150	-				-1.2
3,734,160	-				-0.6
3,734,171	+				-0.0
3,734,171	+				-0.6
3,734,171	+				+0.9
3,734,171	+				+0.6
3,734,179	-				-0.2
3,734,239	+				-0.1
3,734,239	+				+0.0
3,734,239	+				+0.1
3,734,239	+				-0.5
3,734,239	+				-0.7
3,734,239	+				+0.5
3,734,239	+				+1.0
3,734,239	+				+0.3
3,734,240	+				-0.0
3,734,240	+				-0.5
3,734,240	+				+0.8
3,734,240	+				-0.6
3,734,240	+				+0.6
3,734,247	-				+0.4
3,734,247	-				-1.2
3,734,247	-				-1.0
3,734,247	-				-0.4
3,734,247	-				-0.0
3,734,247	-				+1.7
3,734,247	-				-0.0
3,734,247	-				+0.4
3,734,248	-				-0.0
3,734,248	-				-1.7
3,734,248	-				+1.6
3,734,248	-				+0.2
3,734,248	-				-0.4
3,734,248	-				-0.9
3,734,248	-				+0.3
3,734,248	-				-0.3
3,734,248	-				+0.5
3,734,248	-				-0.0
3,734,248	-				-0.0
3,734,248	-				-0.9
3,734,248	-				-1.3
3,734,248	-				-0.2
3,734,248	-				-0.3
3,734,248	-				-0.5
3,734,248	-				+0.7
3,734,248	-				+1.4
3,734,248	-				+0.6
3,734,248	-				+0.1
3,734,248	-				-1.3
3,734,248	-				-0.1
3,734,248	-				+0.1
3,734,248	-				-0.3
3,734,248	-				-1.7
3,734,248	-				-1.0
3,734,248	-				-0.3
3,734,248	-				-0.4
3,734,248	-				-0.8
3,734,248	-				-0.5
3,734,294	-				+0.3
3,734,366	+				+0.4
3,734,388	+				+0.2
3,734,420	+				+0.0
3,734,420	+				-1.3
3,734,438	-				-0.7
3,734,438	-				-0.3
3,734,455	+				+0.0
3,734,463	-				-0.2
3,734,463	-				-0.2
3,734,515	+				-1.0
3,734,517	+				-1.3
3,734,518	-				-0.1
3,734,604	+				+0.7
3,734,604	+				-0.1
3,734,604	+				+1.0
3,734,612	-				+0.1
3,734,612	-				+0.4
3,734,612	-				-0.4
3,734,681	-		PGA1_c35610	0.15	-0.8
3,734,694	+		PGA1_c35610	0.17	+0.0
3,734,728	-		PGA1_c35610	0.22	+0.1
3,734,751	+		PGA1_c35610	0.25	-0.0
3,734,759	-		PGA1_c35610	0.26	-0.4
3,734,778	+		PGA1_c35610	0.28	-0.6
3,734,793	-		PGA1_c35610	0.31	+1.3
3,734,809	+		PGA1_c35610	0.33	+0.3
3,734,831	-		PGA1_c35610	0.36	+0.3
3,734,832	+		PGA1_c35610	0.36	+1.3
3,734,837	+		PGA1_c35610	0.36	+0.3
3,734,837	+		PGA1_c35610	0.36	+0.6
3,734,876	+		PGA1_c35610	0.42	-0.4
3,734,899	-		PGA1_c35610	0.45	-1.1
3,734,899	-		PGA1_c35610	0.45	+0.4
3,734,899	-		PGA1_c35610	0.45	-0.3
3,734,899	-		PGA1_c35610	0.45	-0.5
3,734,909	-		PGA1_c35610	0.46	+1.4
3,734,977	+		PGA1_c35610	0.55	+1.5
3,734,986	-		PGA1_c35610	0.56	+1.4
3,735,027	+		PGA1_c35610	0.62	+0.4
3,735,027	+		PGA1_c35610	0.62	-0.6
3,735,027	+		PGA1_c35610	0.62	-1.6
3,735,027	+		PGA1_c35610	0.62	-0.0
3,735,035	-		PGA1_c35610	0.63	+1.3
3,735,035	-		PGA1_c35610	0.63	+0.2
3,735,035	-		PGA1_c35610	0.63	+0.6
3,735,035	-		PGA1_c35610	0.63	-0.2
3,735,035	-		PGA1_c35610	0.63	+0.7
3,735,041	+		PGA1_c35610	0.64	-0.0
3,735,071	+		PGA1_c35610	0.68	-0.1
3,735,071	+		PGA1_c35610	0.68	+0.0
3,735,138	+		PGA1_c35610	0.77	+0.6
3,735,138	+		PGA1_c35610	0.77	-0.4
3,735,146	-		PGA1_c35610	0.78	+2.3
3,735,146	-		PGA1_c35610	0.78	-0.0
3,735,152	-		PGA1_c35610	0.79	+0.6
3,735,185	-		PGA1_c35610	0.83	+1.3
3,735,194	+		PGA1_c35610	0.84	-0.2
3,735,194	+		PGA1_c35610	0.84	+0.5
3,735,202	-		PGA1_c35610	0.85	-0.4
3,735,216	+		PGA1_c35610	0.87	+2.0
3,735,303	+				+0.8
3,735,344	+		PGA1_c35620	0.13	+0.9
3,735,352	-		PGA1_c35620	0.15	+1.0
3,735,352	-		PGA1_c35620	0.15	+0.3
3,735,354	+		PGA1_c35620	0.16	+0.9
3,735,395	-		PGA1_c35620	0.30	+1.1
3,735,411	+		PGA1_c35620	0.35	-0.4
3,735,421	-		PGA1_c35620	0.39	+0.0
3,735,479	+		PGA1_c35620	0.58	+0.4
3,735,486	-		PGA1_c35620	0.61	+0.3
3,735,488	-		PGA1_c35620	0.61	-0.1
3,735,510	-		PGA1_c35620	0.69	+0.6
3,735,511	-		PGA1_c35620	0.69	+0.4
3,735,612	+				+0.5
3,735,612	+				-0.3
3,735,629	+				+0.7
3,735,646	+				-2.0
3,735,654	-				+2.0
3,735,654	-				+1.2
3,735,666	+		PGA1_c35630	0.12	-0.6
3,735,666	+		PGA1_c35630	0.12	-0.2
3,735,674	-		PGA1_c35630	0.13	+0.3
3,735,674	-		PGA1_c35630	0.13	-0.1
3,735,710	-		PGA1_c35630	0.19	+0.3
3,735,710	-		PGA1_c35630	0.19	+0.5
3,735,717	+		PGA1_c35630	0.20	+0.9
3,735,720	-		PGA1_c35630	0.21	-0.2
3,735,720	-		PGA1_c35630	0.21	+0.8
3,735,725	-		PGA1_c35630	0.22	+1.7
3,735,725	-		PGA1_c35630	0.22	+0.4
3,735,727	-		PGA1_c35630	0.22	+0.7
3,735,789	+		PGA1_c35630	0.32	+0.2
3,735,797	+		PGA1_c35630	0.34	+0.2
3,735,805	-		PGA1_c35630	0.35	-2.7
3,735,842	+		PGA1_c35630	0.41	-0.7
3,735,842	+		PGA1_c35630	0.41	-0.0
3,735,914	+		PGA1_c35630	0.53	+0.5
3,735,917	-		PGA1_c35630	0.54	+0.1
3,735,917	-		PGA1_c35630	0.54	+0.8
3,735,917	-		PGA1_c35630	0.54	+1.1
3,735,919	+		PGA1_c35630	0.54	-0.2
3,735,919	+		PGA1_c35630	0.54	+0.5
3,735,919	+		PGA1_c35630	0.54	+2.2
3,735,919	+		PGA1_c35630	0.54	+0.5
3,735,922	-		PGA1_c35630	0.55	+0.5
3,735,927	-		PGA1_c35630	0.56	+0.4
3,735,927	-		PGA1_c35630	0.56	+0.3
3,736,001	-		PGA1_c35630	0.68	-0.2
3,736,011	+		PGA1_c35630	0.70	+1.1
3,736,011	+		PGA1_c35630	0.70	-0.3
3,736,011	+		PGA1_c35630	0.70	+0.3
3,736,019	-		PGA1_c35630	0.71	+0.1
3,736,019	-		PGA1_c35630	0.71	-0.2
3,736,019	-		PGA1_c35630	0.71	-0.1
3,736,019	-		PGA1_c35630	0.71	+0.4
3,736,019	-		PGA1_c35630	0.71	-0.9
3,736,019	-		PGA1_c35630	0.71	-0.1
3,736,019	-		PGA1_c35630	0.71	+0.6
3,736,019	-		PGA1_c35630	0.71	-0.4
3,736,019	-		PGA1_c35630	0.71	+2.0
3,736,031	-		PGA1_c35630	0.73	-0.6
3,736,035	+		PGA1_c35630	0.74	-0.1
3,736,041	-		PGA1_c35630	0.75	+1.1
3,736,041	-		PGA1_c35630	0.75	-0.3
3,736,056	+		PGA1_c35630	0.77	+0.4
3,736,060	+		PGA1_c35630	0.78	+0.5
3,736,060	+		PGA1_c35630	0.78	-0.7
3,736,060	+		PGA1_c35630	0.78	+1.2
3,736,068	-		PGA1_c35630	0.79	+1.1
3,736,072	+		PGA1_c35630	0.80	-1.5
3,736,139	+				+0.7
3,736,211	+				+0.7
3,736,233	-				-0.1
3,736,248	-				-0.1
3,736,293	-				+0.7
3,736,307	+				+0.4