Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33780

Experiment: D-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (N)
3,540,787	-		PGA1_c33770	0.35	+0.7
3,540,809	-		PGA1_c33770	0.37	-0.5
3,540,854	+		PGA1_c33770	0.40	-1.0
3,540,904	-		PGA1_c33770	0.43	+0.5
3,540,904	-		PGA1_c33770	0.43	-0.2
3,540,976	-		PGA1_c33770	0.48	-0.5
3,540,981	-		PGA1_c33770	0.48	+0.9
3,540,991	-		PGA1_c33770	0.49	+0.3
3,540,992	+		PGA1_c33770	0.49	-0.0
3,540,997	+		PGA1_c33770	0.49	+0.2
3,541,005	-		PGA1_c33770	0.50	+0.2
3,541,030	+		PGA1_c33770	0.51	+0.2
3,541,076	+		PGA1_c33770	0.54	-1.3
3,541,084	+		PGA1_c33770	0.55	+0.6
3,541,084	-		PGA1_c33770	0.55	+0.3
3,541,094	-		PGA1_c33770	0.55	+0.4
3,541,100	+		PGA1_c33770	0.56	+0.6
3,541,100	+		PGA1_c33770	0.56	-0.0
3,541,102	+		PGA1_c33770	0.56	-0.1
3,541,108	-		PGA1_c33770	0.56	-0.3
3,541,137	+		PGA1_c33770	0.58	-1.1
3,541,140	-		PGA1_c33770	0.58	-2.5
3,541,158	+		PGA1_c33770	0.59	+2.2
3,541,201	+		PGA1_c33770	0.62	+0.4
3,541,216	-		PGA1_c33770	0.63	-0.5
3,541,322	+		PGA1_c33770	0.70	-0.2
3,541,330	-		PGA1_c33770	0.70	-0.2
3,541,361	+		PGA1_c33770	0.72	-1.2
3,541,394	-		PGA1_c33770	0.75	-0.1
3,541,412	+		PGA1_c33770	0.76	+0.6
3,541,464	-		PGA1_c33770	0.79	-0.1
3,541,466	-		PGA1_c33770	0.79	-0.8
3,541,466	-		PGA1_c33770	0.79	+0.5
3,541,476	+		PGA1_c33770	0.80	-1.1
3,541,484	-		PGA1_c33770	0.80	+0.8
3,541,484	-		PGA1_c33770	0.80	+0.3
3,541,484	-		PGA1_c33770	0.80	+0.0
3,541,504	-		PGA1_c33770	0.82	-0.4
3,541,553	+		PGA1_c33770	0.85	+2.0
3,541,556	-		PGA1_c33770	0.85	-0.7
3,541,635	+				-1.3
3,541,644	+				+0.5
3,541,649	+				+0.7
3,541,654	+				-0.2
3,541,662	-				-0.8
3,541,734	+				+0.4
3,541,746	+				-0.9
3,541,770	-				+0.1
3,541,821	+				+0.5
3,541,837	+				-0.4
3,541,837	+				-0.1
3,541,843	+				+0.6
3,541,847	-				-0.1
3,541,874	+		PGA1_c33780	0.12	+0.1
3,541,874	+		PGA1_c33780	0.12	-0.1
3,541,874	+		PGA1_c33780	0.12	+1.1
3,541,882	-		PGA1_c33780	0.14	+0.6
3,541,882	-		PGA1_c33780	0.14	+0.5
3,541,882	-		PGA1_c33780	0.14	+0.4
3,541,909	+		PGA1_c33780	0.17	+0.5
3,541,916	+		PGA1_c33780	0.18	-0.4
3,541,916	+		PGA1_c33780	0.18	+0.6
3,541,917	-		PGA1_c33780	0.18	+0.1
3,541,921	+		PGA1_c33780	0.19	+1.0
3,541,924	-		PGA1_c33780	0.19	+1.0
3,541,924	-		PGA1_c33780	0.19	+0.7
3,541,933	+		PGA1_c33780	0.21	+1.4
3,541,936	-		PGA1_c33780	0.21	+0.1
3,541,941	-		PGA1_c33780	0.22	-0.0
3,541,951	-		PGA1_c33780	0.23	-0.5
3,541,952	-		PGA1_c33780	0.23	+1.1
3,541,982	-		PGA1_c33780	0.28	-0.7
3,541,992	-		PGA1_c33780	0.29	+0.6
3,542,083	+		PGA1_c33780	0.42	+1.0
3,542,084	-		PGA1_c33780	0.42	+0.5
3,542,091	-		PGA1_c33780	0.43	-1.6
3,542,092	+		PGA1_c33780	0.43	+0.1
3,542,093	+		PGA1_c33780	0.43	+0.9
3,542,100	-		PGA1_c33780	0.44	+0.6
3,542,100	-		PGA1_c33780	0.44	-0.2
3,542,100	-		PGA1_c33780	0.44	-0.5
3,542,132	-		PGA1_c33780	0.48	-0.3
3,542,196	+		PGA1_c33780	0.57	+0.2
3,542,206	+		PGA1_c33780	0.59	+0.2
3,542,206	+		PGA1_c33780	0.59	+0.4
3,542,279	-		PGA1_c33780	0.69	+1.0
3,542,279	-		PGA1_c33780	0.69	-0.5
3,542,290	-		PGA1_c33780	0.70	+1.0
3,542,359	+		PGA1_c33780	0.80	+1.0
3,542,359	+		PGA1_c33780	0.80	-0.6
3,542,363	+		PGA1_c33780	0.80	+0.2
3,542,367	-		PGA1_c33780	0.81	+0.4
3,542,371	+		PGA1_c33780	0.82	+1.7
3,542,379	-		PGA1_c33780	0.83	+0.1
3,542,402	+		PGA1_c33780	0.86	+0.5
3,542,406	+		PGA1_c33780	0.86	-0.6
3,542,406	+		PGA1_c33780	0.86	+0.0
3,542,406	+		PGA1_c33780	0.86	+0.1
3,542,406	+		PGA1_c33780	0.86	+1.4
3,542,406	+		PGA1_c33780	0.86	+0.4
3,542,414	-		PGA1_c33780	0.88	+0.5
3,542,425	+		PGA1_c33780	0.89	+0.3
3,542,465	-				+0.1
3,542,467	+				+1.8
3,542,467	+				+0.1
3,542,467	+				-0.7
3,542,467	+				+0.6
3,542,467	+				-0.1
3,542,467	+				+0.1
3,542,467	+				-0.1
3,542,467	+				-0.2
3,542,467	+				+0.0
3,542,467	+				-0.5
3,542,467	+				+0.6
3,542,467	+				+0.1
3,542,467	+				+0.0
3,542,467	+				-1.3
3,542,475	-				-0.6
3,542,475	-				+0.6
3,542,475	-				-0.5
3,542,475	-				+0.1
3,542,475	-				+1.6
3,542,475	-				+0.5
3,542,475	-				+0.9
3,542,475	-				-0.3
3,542,475	-				+0.1
3,542,475	-				-0.2
3,542,475	-				-0.5
3,542,475	-				+0.7
3,542,475	-				+0.4
3,542,475	-				+0.3
3,542,475	-				+2.0
3,542,510	+				+0.7
3,542,510	+				-0.7
3,542,510	+				+0.5
3,542,518	-				-1.3
3,542,518	-				+1.4
3,542,518	-				-0.8
3,542,556	+				-0.1
3,542,628	+				+0.1
3,542,628	+				+0.3
3,542,636	-				+0.2
3,542,650	+				+0.7
3,542,655	+				+0.1
3,542,658	-				+1.1
3,542,663	+				-0.1
3,542,671	-				-1.3
3,542,699	+				+0.4
3,542,701	+				-0.2
3,542,701	+				-1.7
3,542,701	+				+0.5
3,542,701	+				-1.4
3,542,701	+				-0.1
3,542,701	+				+0.3
3,542,701	+				-0.4
3,542,701	+				-0.2
3,542,701	+				-0.6
3,542,701	+				-0.1
3,542,701	+				+0.7
3,542,701	+				+0.8
3,542,701	+				+0.8
3,542,701	+				-0.5
3,542,701	+				-0.3
3,542,701	+				+0.4
3,542,701	+				+1.0
3,542,701	+				+1.0
3,542,701	+				+0.3
3,542,701	+				+0.1
3,542,709	-				+0.3
3,542,709	-				-1.1
3,542,709	-				-0.3
3,542,709	-				-0.7
3,542,709	-				+0.0
3,542,709	-				-0.2
3,542,709	-				-1.1
3,542,709	-				+0.7
3,542,728	-				-1.3
3,542,751	+				+0.2
3,542,759	-				+0.9
3,542,764	-				+1.1
3,542,774	+				-0.5
3,542,787	-				-0.1
3,542,797	-				+0.2
3,542,797	-				-0.3
3,542,802	+				-0.6
3,542,802	+				-1.2
3,542,803	+				-0.9
3,542,810	-				+0.2
3,542,810	-				-0.8
3,542,810	-				+0.2
3,542,810	-				+0.9
3,542,810	-				-1.3
3,542,810	-				-0.4
3,542,810	-				+0.4
3,542,812	+				+0.6
3,542,817	+				+1.0
3,542,820	-				+2.8
3,542,863	+				+1.3
3,542,871	-				+1.8
3,542,871	-				+0.2
3,542,871	-				+0.8
3,542,947	-				+0.7
3,543,007	-				+0.4
3,543,016	+				-0.1
3,543,033	+				+0.5
3,543,050	-				-2.0
3,543,068	-				-0.3
3,543,105	+				-0.2
3,543,124	+				+1.1
3,543,124	+				-0.3
3,543,124	+				-0.5
3,543,124	+				+1.0
3,543,132	+		PGA1_c33790	0.11	+0.3
3,543,132	-		PGA1_c33790	0.11	-0.1
3,543,178	-		PGA1_c33790	0.16	-0.2
3,543,187	-		PGA1_c33790	0.17	+0.4
3,543,206	-		PGA1_c33790	0.20	-0.5
3,543,223	+		PGA1_c33790	0.22	+0.1
3,543,240	+		PGA1_c33790	0.24	+1.8
3,543,240	+		PGA1_c33790	0.24	+0.1
3,543,240	+		PGA1_c33790	0.24	-0.7
3,543,240	+		PGA1_c33790	0.24	-0.2
3,543,240	+		PGA1_c33790	0.24	+0.4
3,543,240	+		PGA1_c33790	0.24	-0.2
3,543,240	+		PGA1_c33790	0.24	+0.5
3,543,240	+		PGA1_c33790	0.24	-0.1
3,543,240	+		PGA1_c33790	0.24	-0.5
3,543,240	+		PGA1_c33790	0.24	-0.1
3,543,240	+		PGA1_c33790	0.24	+0.2
3,543,240	+		PGA1_c33790	0.24	+1.1
3,543,240	+		PGA1_c33790	0.24	+0.7
3,543,240	+		PGA1_c33790	0.24	+0.8
3,543,240	+		PGA1_c33790	0.24	-0.7
3,543,240	+		PGA1_c33790	0.24	+0.8
3,543,240	+		PGA1_c33790	0.24	-0.9
3,543,248	-		PGA1_c33790	0.25	+0.3
3,543,248	-		PGA1_c33790	0.25	+0.2
3,543,248	-		PGA1_c33790	0.25	+0.2
3,543,248	-		PGA1_c33790	0.25	+0.4
3,543,248	-		PGA1_c33790	0.25	+0.5
3,543,248	-		PGA1_c33790	0.25	+1.0
3,543,248	-		PGA1_c33790	0.25	+0.3
3,543,248	-		PGA1_c33790	0.25	+0.5
3,543,248	-		PGA1_c33790	0.25	-0.2
3,543,248	-		PGA1_c33790	0.25	-1.4
3,543,254	-		PGA1_c33790	0.26	+1.1
3,543,258	-		PGA1_c33790	0.26	+0.2
3,543,258	-		PGA1_c33790	0.26	-0.7
3,543,267	+		PGA1_c33790	0.27	+0.1
3,543,290	-		PGA1_c33790	0.30	-0.8
3,543,290	-		PGA1_c33790	0.30	-0.5
3,543,295	-		PGA1_c33790	0.31	-0.2
3,543,300	+		PGA1_c33790	0.31	+0.8
3,543,308	-		PGA1_c33790	0.32	-1.1
3,543,308	-		PGA1_c33790	0.32	+1.0
3,543,308	-		PGA1_c33790	0.32	+0.0
3,543,308	-		PGA1_c33790	0.32	+1.1
3,543,308	-		PGA1_c33790	0.32	-0.1
3,543,308	-		PGA1_c33790	0.32	-0.4
3,543,308	-		PGA1_c33790	0.32	+0.9
3,543,313	-		PGA1_c33790	0.33	+0.2
3,543,463	+		PGA1_c33790	0.51	+0.6
3,543,463	+		PGA1_c33790	0.51	-0.3
3,543,471	-		PGA1_c33790	0.52	-0.5
3,543,473	+		PGA1_c33790	0.52	-1.3
3,543,473	+		PGA1_c33790	0.52	-0.6
3,543,473	+		PGA1_c33790	0.52	-0.4