Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31450

Experiment: D-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (N)
3,285,112	-		PGA1_c31440	0.12	-0.9
3,285,112	-		PGA1_c31440	0.12	+0.7
3,285,123	+		PGA1_c31440	0.13	-0.1
3,285,182	+		PGA1_c31440	0.19	+0.3
3,285,185	-		PGA1_c31440	0.19	-0.1
3,285,213	-		PGA1_c31440	0.22	+0.6
3,285,234	+		PGA1_c31440	0.24	+1.7
3,285,300	-		PGA1_c31440	0.30	-2.0
3,285,382	-		PGA1_c31440	0.38	+0.5
3,285,397	+		PGA1_c31440	0.40	+0.2
3,285,444	+		PGA1_c31440	0.44	+0.5
3,285,459	+		PGA1_c31440	0.46	+0.5
3,285,467	-		PGA1_c31440	0.47	+0.3
3,285,484	+		PGA1_c31440	0.48	-0.2
3,285,540	+		PGA1_c31440	0.54	-0.2
3,285,548	-		PGA1_c31440	0.54	+0.2
3,285,582	-		PGA1_c31440	0.58	+0.1
3,285,593	-		PGA1_c31440	0.59	+0.6
3,285,777	+		PGA1_c31440	0.77	+1.0
3,285,777	+		PGA1_c31440	0.77	+0.8
3,285,777	+		PGA1_c31440	0.77	+0.3
3,285,777	+		PGA1_c31440	0.77	+0.5
3,285,785	-		PGA1_c31440	0.77	-0.4
3,285,787	+		PGA1_c31440	0.78	+0.5
3,285,790	-		PGA1_c31440	0.78	+0.0
3,285,860	+		PGA1_c31440	0.85	-1.5
3,285,860	+		PGA1_c31440	0.85	+0.5
3,285,860	+		PGA1_c31440	0.85	+0.7
3,285,868	-		PGA1_c31440	0.85	+0.7
3,285,868	-		PGA1_c31440	0.85	+0.2
3,285,868	-		PGA1_c31440	0.85	+0.2
3,285,868	-		PGA1_c31440	0.85	+0.9
3,285,904	+		PGA1_c31440	0.89	+0.4
3,285,915	+				-0.1
3,285,958	+				+1.0
3,286,060	-				+1.2
3,286,079	-				+0.4
3,286,081	+				-0.6
3,286,081	+				-0.2
3,286,090	+				-0.7
3,286,132	+		PGA1_c31450	0.11	+0.7
3,286,186	-		PGA1_c31450	0.16	+0.8
3,286,222	-		PGA1_c31450	0.19	-0.3
3,286,247	+		PGA1_c31450	0.22	+0.3
3,286,255	-		PGA1_c31450	0.22	+0.6
3,286,258	+		PGA1_c31450	0.23	+0.4
3,286,258	+		PGA1_c31450	0.23	-1.4
3,286,258	+		PGA1_c31450	0.23	+1.1
3,286,258	+		PGA1_c31450	0.23	+0.9
3,286,265	+		PGA1_c31450	0.23	+0.4
3,286,266	-		PGA1_c31450	0.23	+0.4
3,286,272	-		PGA1_c31450	0.24	+0.5
3,286,294	-		PGA1_c31450	0.26	-0.1
3,286,419	-		PGA1_c31450	0.38	+0.3
3,286,434	-		PGA1_c31450	0.39	+0.8
3,286,440	+		PGA1_c31450	0.40	+0.1
3,286,493	+		PGA1_c31450	0.45	+1.0
3,286,501	-		PGA1_c31450	0.45	+0.2
3,286,557	-		PGA1_c31450	0.51	-0.6
3,286,574	+		PGA1_c31450	0.52	-0.5
3,286,742	-		PGA1_c31450	0.68	-0.8
3,286,753	+		PGA1_c31450	0.69	-0.3
3,286,790	+		PGA1_c31450	0.72	+1.4
3,286,790	+		PGA1_c31450	0.72	+0.1
3,286,790	+		PGA1_c31450	0.72	-0.7
3,286,790	+		PGA1_c31450	0.72	+1.5
3,286,790	+		PGA1_c31450	0.72	+0.8
3,286,790	+		PGA1_c31450	0.72	+1.8
3,286,798	-		PGA1_c31450	0.73	+0.3
3,286,798	-		PGA1_c31450	0.73	-0.1
3,286,798	-		PGA1_c31450	0.73	+1.2
3,286,798	-		PGA1_c31450	0.73	-0.1
3,286,802	+		PGA1_c31450	0.73	+0.2
3,286,840	-		PGA1_c31450	0.77	+1.0
3,286,871	-		PGA1_c31450	0.80	-0.8
3,286,877	-		PGA1_c31450	0.80	-0.0
3,286,882	+		PGA1_c31450	0.81	+1.6
3,286,889	+		PGA1_c31450	0.82	+0.6
3,286,889	+		PGA1_c31450	0.82	+0.4
3,286,889	-		PGA1_c31450	0.82	+0.8
3,286,917	-		PGA1_c31450	0.84	-0.1
3,286,929	+		PGA1_c31450	0.85	-0.3
3,286,929	+		PGA1_c31450	0.85	+1.5
3,286,983	+				+0.6
3,286,988	+				+0.1
3,287,018	-				+0.8
3,287,092	+				+1.4
3,287,111	-				+0.3
3,287,121	+				-1.1
3,287,121	+				-1.0
3,287,121	+				+0.1
3,287,124	-				-0.4
3,287,129	-				+0.7
3,287,199	-				-0.8
3,287,229	-				-0.0
3,287,235	-				-0.2
3,287,235	-				+0.7
3,287,269	-		PGA1_c31460	0.10	-0.3
3,287,269	-		PGA1_c31460	0.10	+0.3
3,287,301	+		PGA1_c31460	0.12	-0.4
3,287,301	+		PGA1_c31460	0.12	+0.2
3,287,309	+		PGA1_c31460	0.13	+0.5
3,287,309	-		PGA1_c31460	0.13	+0.6
3,287,309	-		PGA1_c31460	0.13	+0.3
3,287,338	+		PGA1_c31460	0.14	+0.3
3,287,348	+		PGA1_c31460	0.15	-0.6
3,287,348	+		PGA1_c31460	0.15	+0.1
3,287,348	+		PGA1_c31460	0.15	-0.3
3,287,348	+		PGA1_c31460	0.15	-0.6
3,287,348	+		PGA1_c31460	0.15	+0.9
3,287,348	+		PGA1_c31460	0.15	+0.2
3,287,348	+		PGA1_c31460	0.15	-0.7
3,287,348	+		PGA1_c31460	0.15	-0.3
3,287,348	+		PGA1_c31460	0.15	+0.9
3,287,348	+		PGA1_c31460	0.15	+0.3
3,287,348	+		PGA1_c31460	0.15	-0.4
3,287,348	+		PGA1_c31460	0.15	-0.6
3,287,348	+		PGA1_c31460	0.15	-0.3
3,287,348	+		PGA1_c31460	0.15	+1.0
3,287,348	+		PGA1_c31460	0.15	-0.7
3,287,348	+		PGA1_c31460	0.15	+0.7
3,287,348	+		PGA1_c31460	0.15	-1.2
3,287,348	+		PGA1_c31460	0.15	+0.0
3,287,348	+		PGA1_c31460	0.15	+0.8
3,287,348	+		PGA1_c31460	0.15	-0.6
3,287,348	+		PGA1_c31460	0.15	+1.8
3,287,353	-		PGA1_c31460	0.15	-1.2
3,287,356	-		PGA1_c31460	0.15	+0.2
3,287,356	-		PGA1_c31460	0.15	+0.0
3,287,356	-		PGA1_c31460	0.15	-0.3
3,287,356	-		PGA1_c31460	0.15	-0.5
3,287,356	-		PGA1_c31460	0.15	+0.1
3,287,356	-		PGA1_c31460	0.15	-0.1
3,287,356	-		PGA1_c31460	0.15	-0.1
3,287,356	-		PGA1_c31460	0.15	-0.4
3,287,356	-		PGA1_c31460	0.15	-0.2
3,287,356	-		PGA1_c31460	0.15	+0.2
3,287,356	-		PGA1_c31460	0.15	+1.3
3,287,356	-		PGA1_c31460	0.15	+0.1
3,287,356	-		PGA1_c31460	0.15	+0.6
3,287,356	-		PGA1_c31460	0.15	+0.3
3,287,356	-		PGA1_c31460	0.15	+0.6
3,287,356	-		PGA1_c31460	0.15	+0.3
3,287,380	+		PGA1_c31460	0.17	+1.8
3,287,380	+		PGA1_c31460	0.17	+0.3
3,287,382	-		PGA1_c31460	0.17	+0.4
3,287,388	-		PGA1_c31460	0.17	+0.4
3,287,388	-		PGA1_c31460	0.17	-0.0
3,287,388	-		PGA1_c31460	0.17	+0.9
3,287,388	-		PGA1_c31460	0.17	+0.6
3,287,388	-		PGA1_c31460	0.17	-0.2
3,287,388	-		PGA1_c31460	0.17	-0.8
3,287,420	-		PGA1_c31460	0.19	-0.1
3,287,427	-		PGA1_c31460	0.20	-0.9
3,287,572	-		PGA1_c31460	0.28	-0.7
3,287,572	-		PGA1_c31460	0.28	+0.0
3,287,597	-		PGA1_c31460	0.29	+1.0
3,287,691	+		PGA1_c31460	0.35	-0.0
3,287,691	+		PGA1_c31460	0.35	-0.2
3,287,699	-		PGA1_c31460	0.35	+1.0
3,287,720	+		PGA1_c31460	0.37	-1.6
3,287,889	+		PGA1_c31460	0.47	-0.2
3,287,897	-		PGA1_c31460	0.47	+1.5
3,287,962	+		PGA1_c31460	0.51	-0.4
3,288,006	-		PGA1_c31460	0.53	-0.3
3,288,050	+		PGA1_c31460	0.56	+0.3
3,288,058	-		PGA1_c31460	0.56	+0.6