Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27490

Experiment: D-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (N)
2,863,516	-		PGA1_c27480	0.28	+0.7
2,863,516	-		PGA1_c27480	0.28	+0.5
2,863,521	-		PGA1_c27480	0.29	-0.7
2,863,521	-		PGA1_c27480	0.29	+0.5
2,863,521	-		PGA1_c27480	0.29	-0.1
2,863,523	-		PGA1_c27480	0.29	+1.1
2,863,543	-		PGA1_c27480	0.31	-0.6
2,863,543	-		PGA1_c27480	0.31	+0.4
2,863,545	+		PGA1_c27480	0.31	-0.9
2,863,553	-		PGA1_c27480	0.32	+1.6
2,863,553	-		PGA1_c27480	0.32	+0.0
2,863,553	-		PGA1_c27480	0.32	+0.0
2,863,573	+		PGA1_c27480	0.34	-0.5
2,863,583	+		PGA1_c27480	0.35	-0.4
2,863,583	+		PGA1_c27480	0.35	+1.0
2,863,583	+		PGA1_c27480	0.35	+1.0
2,863,583	+		PGA1_c27480	0.35	-0.2
2,863,583	+		PGA1_c27480	0.35	-0.4
2,863,583	+		PGA1_c27480	0.35	+1.0
2,863,590	+		PGA1_c27480	0.36	+0.6
2,863,591	-		PGA1_c27480	0.36	-0.1
2,863,591	-		PGA1_c27480	0.36	-1.1
2,863,597	+		PGA1_c27480	0.37	+0.2
2,863,598	-		PGA1_c27480	0.37	-0.7
2,863,599	+		PGA1_c27480	0.37	-1.4
2,863,599	+		PGA1_c27480	0.37	-0.8
2,863,599	+		PGA1_c27480	0.37	+1.2
2,863,607	-		PGA1_c27480	0.38	-0.1
2,863,614	+		PGA1_c27480	0.38	-0.4
2,863,635	+		PGA1_c27480	0.40	-0.6
2,863,635	+		PGA1_c27480	0.40	+0.4
2,863,637	-		PGA1_c27480	0.41	+0.9
2,863,637	-		PGA1_c27480	0.41	-0.3
2,863,637	-		PGA1_c27480	0.41	+1.3
2,863,651	+		PGA1_c27480	0.42	-0.6
2,863,651	+		PGA1_c27480	0.42	-0.3
2,863,651	+		PGA1_c27480	0.42	-1.2
2,863,651	+		PGA1_c27480	0.42	-1.2
2,863,651	+		PGA1_c27480	0.42	-0.1
2,863,651	+		PGA1_c27480	0.42	+0.3
2,863,651	+		PGA1_c27480	0.42	-0.1
2,863,651	+		PGA1_c27480	0.42	+0.2
2,863,651	+		PGA1_c27480	0.42	-1.2
2,863,651	+		PGA1_c27480	0.42	-0.5
2,863,651	+		PGA1_c27480	0.42	+0.3
2,863,651	+		PGA1_c27480	0.42	-1.0
2,863,651	+		PGA1_c27480	0.42	-0.6
2,863,651	+		PGA1_c27480	0.42	-1.4
2,863,651	+		PGA1_c27480	0.42	-0.6
2,863,651	+		PGA1_c27480	0.42	-0.5
2,863,651	+		PGA1_c27480	0.42	-0.5
2,863,651	+		PGA1_c27480	0.42	-0.2
2,863,651	+		PGA1_c27480	0.42	+0.0
2,863,651	+		PGA1_c27480	0.42	+0.1
2,863,651	+		PGA1_c27480	0.42	-1.0
2,863,651	+		PGA1_c27480	0.42	-0.6
2,863,651	+		PGA1_c27480	0.42	+0.7
2,863,651	+		PGA1_c27480	0.42	+0.9
2,863,651	+		PGA1_c27480	0.42	+0.3
2,863,651	+		PGA1_c27480	0.42	-0.2
2,863,651	+		PGA1_c27480	0.42	-0.7
2,863,651	+		PGA1_c27480	0.42	-0.3
2,863,651	+		PGA1_c27480	0.42	+0.4
2,863,651	+		PGA1_c27480	0.42	-0.1
2,863,651	+		PGA1_c27480	0.42	-0.3
2,863,651	+		PGA1_c27480	0.42	-0.4
2,863,651	+		PGA1_c27480	0.42	-0.0
2,863,651	+		PGA1_c27480	0.42	+0.9
2,863,651	+		PGA1_c27480	0.42	+0.4
2,863,651	+		PGA1_c27480	0.42	+0.3
2,863,651	+		PGA1_c27480	0.42	+0.4
2,863,651	+		PGA1_c27480	0.42	+0.2
2,863,661	+		PGA1_c27480	0.43	+1.2
2,863,661	+		PGA1_c27480	0.43	-0.7
2,863,661	+		PGA1_c27480	0.43	-0.5
2,863,661	+		PGA1_c27480	0.43	-2.3
2,863,662	+		PGA1_c27480	0.43	-0.9
2,863,662	+		PGA1_c27480	0.43	-0.3
2,863,662	+		PGA1_c27480	0.43	+0.0
2,863,662	+		PGA1_c27480	0.43	-0.7
2,863,662	+		PGA1_c27480	0.43	-0.3
2,863,662	+		PGA1_c27480	0.43	+0.8
2,863,662	+		PGA1_c27480	0.43	+0.6
2,863,662	+		PGA1_c27480	0.43	-0.3
2,863,662	+		PGA1_c27480	0.43	-1.6
2,863,662	+		PGA1_c27480	0.43	-0.4
2,863,662	+		PGA1_c27480	0.43	-0.5
2,863,662	+		PGA1_c27480	0.43	+0.6
2,863,662	+		PGA1_c27480	0.43	+0.6
2,863,669	-		PGA1_c27480	0.44	+1.3
2,863,669	-		PGA1_c27480	0.44	+1.0
2,863,670	-		PGA1_c27480	0.44	+0.3
2,863,670	-		PGA1_c27480	0.44	+0.1
2,863,670	-		PGA1_c27480	0.44	-0.3
2,863,670	-		PGA1_c27480	0.44	+0.1
2,863,670	-		PGA1_c27480	0.44	+0.3
2,863,670	-		PGA1_c27480	0.44	-0.7
2,863,670	-		PGA1_c27480	0.44	-0.3
2,863,670	-		PGA1_c27480	0.44	+0.2
2,863,670	-		PGA1_c27480	0.44	-0.3
2,863,670	-		PGA1_c27480	0.44	-0.9
2,863,670	-		PGA1_c27480	0.44	+1.6
2,863,670	-		PGA1_c27480	0.44	-0.2
2,863,672	+		PGA1_c27480	0.44	-1.1
2,863,672	+		PGA1_c27480	0.44	-0.7
2,863,672	+		PGA1_c27480	0.44	+0.8
2,863,680	-		PGA1_c27480	0.45	+0.1
2,863,690	-		PGA1_c27480	0.46	-0.2
2,863,727	+		PGA1_c27480	0.50	+1.6
2,863,727	+		PGA1_c27480	0.50	-0.9
2,863,735	-		PGA1_c27480	0.51	+0.1
2,863,735	-		PGA1_c27480	0.51	-0.7
2,863,741	+		PGA1_c27480	0.51	+0.3
2,863,750	-		PGA1_c27480	0.52	+0.1
2,863,752	+		PGA1_c27480	0.52	+0.5
2,863,755	-		PGA1_c27480	0.53	+0.8
2,863,760	-		PGA1_c27480	0.53	-0.2
2,863,762	+		PGA1_c27480	0.53	+0.2
2,863,769	+		PGA1_c27480	0.54	+0.3
2,863,777	-		PGA1_c27480	0.55	+0.9
2,863,779	+		PGA1_c27480	0.55	-0.1
2,863,788	+		PGA1_c27480	0.56	+0.4
2,863,790	+		PGA1_c27480	0.56	+0.9
2,863,795	-		PGA1_c27480	0.57	-0.4
2,863,795	-		PGA1_c27480	0.57	-2.1
2,863,797	+		PGA1_c27480	0.57	-0.5
2,863,805	-		PGA1_c27480	0.58	-0.1
2,863,808	+		PGA1_c27480	0.58	+0.9
2,863,808	+		PGA1_c27480	0.58	-0.8
2,863,808	+		PGA1_c27480	0.58	-0.2
2,863,808	+		PGA1_c27480	0.58	-0.1
2,863,813	+		PGA1_c27480	0.59	+0.4
2,863,819	-		PGA1_c27480	0.59	-0.9
2,863,821	-		PGA1_c27480	0.60	-1.3
2,863,821	-		PGA1_c27480	0.60	-0.5
2,863,853	+		PGA1_c27480	0.63	-0.5
2,863,862	+		PGA1_c27480	0.64	+1.6
2,863,862	-		PGA1_c27480	0.64	-1.0
2,863,870	-		PGA1_c27480	0.65	+0.6
2,863,870	-		PGA1_c27480	0.65	-0.3
2,863,870	-		PGA1_c27480	0.65	-0.1
2,863,877	-		PGA1_c27480	0.65	+0.3
2,863,901	-		PGA1_c27480	0.68	-1.0
2,863,901	-		PGA1_c27480	0.68	-0.7
2,863,901	-		PGA1_c27480	0.68	-0.1
2,863,910	+		PGA1_c27480	0.69	+1.0
2,863,910	+		PGA1_c27480	0.69	+0.1
2,863,910	+		PGA1_c27480	0.69	+0.2
2,863,913	-		PGA1_c27480	0.69	-0.5
2,863,925	+		PGA1_c27480	0.70	+0.3
2,863,925	+		PGA1_c27480	0.70	+2.1
2,863,926	+		PGA1_c27480	0.70	+0.6
2,863,930	+		PGA1_c27480	0.71	+1.1
2,863,930	+		PGA1_c27480	0.71	+0.0
2,863,933	-		PGA1_c27480	0.71	-0.8
2,863,935	+		PGA1_c27480	0.71	-0.2
2,863,940	+		PGA1_c27480	0.72	+0.6
2,863,944	-		PGA1_c27480	0.72	+0.9
2,863,948	-		PGA1_c27480	0.72	+0.3
2,863,953	+		PGA1_c27480	0.73	-0.2
2,863,954	+		PGA1_c27480	0.73	-0.4
2,863,958	+		PGA1_c27480	0.74	-1.4
2,863,958	+		PGA1_c27480	0.74	+1.3
2,863,958	+		PGA1_c27480	0.74	+1.3
2,863,958	+		PGA1_c27480	0.74	-0.5
2,863,958	+		PGA1_c27480	0.74	+0.4
2,863,958	+		PGA1_c27480	0.74	-0.6
2,863,958	+		PGA1_c27480	0.74	-1.0
2,863,961	-		PGA1_c27480	0.74	-0.9
2,863,961	-		PGA1_c27480	0.74	-1.5
2,863,961	-		PGA1_c27480	0.74	-0.1
2,863,961	-		PGA1_c27480	0.74	+0.9
2,863,961	-		PGA1_c27480	0.74	-0.1
2,863,963	+		PGA1_c27480	0.74	+1.5
2,863,963	+		PGA1_c27480	0.74	+0.5
2,863,966	-		PGA1_c27480	0.74	-0.1
2,863,968	+		PGA1_c27480	0.75	+0.4
2,863,971	-		PGA1_c27480	0.75	-0.2
2,863,971	-		PGA1_c27480	0.75	+0.7
2,863,980	+		PGA1_c27480	0.76	+0.7
2,863,982	-		PGA1_c27480	0.76	+0.9
2,863,984	-		PGA1_c27480	0.76	+0.5
2,863,988	+		PGA1_c27480	0.77	-2.5
2,863,988	+		PGA1_c27480	0.77	-0.4
2,863,996	-		PGA1_c27480	0.77	+0.1
2,863,996	-		PGA1_c27480	0.77	-0.3
2,863,998	+		PGA1_c27480	0.78	-0.4
2,863,998	+		PGA1_c27480	0.78	+0.4
2,863,998	+		PGA1_c27480	0.78	+0.8
2,863,998	+		PGA1_c27480	0.78	-0.6
2,863,998	+		PGA1_c27480	0.78	+0.6
2,863,998	+		PGA1_c27480	0.78	-0.6
2,864,001	-		PGA1_c27480	0.78	+0.3
2,864,006	-		PGA1_c27480	0.78	+0.0
2,864,006	-		PGA1_c27480	0.78	+0.9
2,864,006	-		PGA1_c27480	0.78	+0.0
2,864,015	+		PGA1_c27480	0.79	-0.7
2,864,015	+		PGA1_c27480	0.79	-0.4
2,864,015	+		PGA1_c27480	0.79	-0.8
2,864,016	+		PGA1_c27480	0.79	-0.1
2,864,019	-		PGA1_c27480	0.80	+0.7
2,864,044	+		PGA1_c27480	0.82	+0.6
2,864,044	+		PGA1_c27480	0.82	-1.0
2,864,050	-		PGA1_c27480	0.83	-0.9
2,864,051	+		PGA1_c27480	0.83	-0.5
2,864,051	-		PGA1_c27480	0.83	+0.0
2,864,052	+		PGA1_c27480	0.83	-0.7
2,864,052	-		PGA1_c27480	0.83	+0.1
2,864,052	-		PGA1_c27480	0.83	+0.2
2,864,052	-		PGA1_c27480	0.83	+0.1
2,864,058	+		PGA1_c27480	0.84	+0.8
2,864,060	-		PGA1_c27480	0.84	-0.1
2,864,068	-		PGA1_c27480	0.85	+0.7
2,864,073	-		PGA1_c27480	0.85	-0.6
2,864,079	+		PGA1_c27480	0.86	-0.3
2,864,079	+		PGA1_c27480	0.86	-0.4
2,864,079	+		PGA1_c27480	0.86	+0.0
2,864,079	+		PGA1_c27480	0.86	-0.4
2,864,079	+		PGA1_c27480	0.86	-0.1
2,864,079	+		PGA1_c27480	0.86	+0.4
2,864,079	+		PGA1_c27480	0.86	+0.6
2,864,079	+		PGA1_c27480	0.86	-0.9
2,864,079	+		PGA1_c27480	0.86	+0.2
2,864,079	+		PGA1_c27480	0.86	-0.3
2,864,079	+		PGA1_c27480	0.86	-0.0
2,864,079	+		PGA1_c27480	0.86	+0.1
2,864,081	+		PGA1_c27480	0.86	+0.0
2,864,081	+		PGA1_c27480	0.86	-0.7
2,864,081	+		PGA1_c27480	0.86	-0.3
2,864,081	+		PGA1_c27480	0.86	+0.0
2,864,081	+		PGA1_c27480	0.86	-1.7
2,864,087	-		PGA1_c27480	0.87	+0.3
2,864,087	-		PGA1_c27480	0.87	-1.2
2,864,087	-		PGA1_c27480	0.87	-0.2
2,864,087	-		PGA1_c27480	0.87	+0.3
2,864,087	-		PGA1_c27480	0.87	+0.0
2,864,087	-		PGA1_c27480	0.87	-1.2
2,864,087	-		PGA1_c27480	0.87	+0.4
2,864,087	-		PGA1_c27480	0.87	-0.2
2,864,087	-		PGA1_c27480	0.87	-1.3
2,864,087	-		PGA1_c27480	0.87	-0.1
2,864,087	-		PGA1_c27480	0.87	-0.6
2,864,087	-		PGA1_c27480	0.87	-0.7
2,864,087	-		PGA1_c27480	0.87	-0.6
2,864,087	-		PGA1_c27480	0.87	+0.2
2,864,087	-		PGA1_c27480	0.87	+1.2
2,864,088	+		PGA1_c27480	0.87	+0.5
2,864,089	-		PGA1_c27480	0.87	-2.7
2,864,091	+		PGA1_c27480	0.87	+0.6
2,864,094	-		PGA1_c27480	0.87	-0.4
2,864,099	-		PGA1_c27480	0.88	+0.9
2,864,104	+		PGA1_c27480	0.88	-0.1
2,864,115	+		PGA1_c27480	0.90	-0.2
2,864,115	+		PGA1_c27480	0.90	-1.0
2,864,121	-				-0.4
2,864,121	-				+0.9
2,864,123	-				-0.1
2,864,125	+				-0.4
2,864,125	+				+0.1
2,864,125	+				-0.2
2,864,125	+				-0.6
2,864,125	+				+0.1
2,864,126	+				+1.4
2,864,133	-				-0.3
2,864,133	-				+0.5
2,864,133	-				-0.1
2,864,133	-				+1.3
2,864,133	-				+1.6
2,864,133	-				+1.0
2,864,134	-				+0.1
2,864,141	+				-0.2
2,864,160	-				+0.3
2,864,172	+				-0.1
2,864,172	+				+0.0
2,864,172	+				-1.3
2,864,180	-				+0.1
2,864,180	-				+0.1
2,864,195	+				-0.6
2,864,201	-				+1.4
2,864,201	-				-0.5
2,864,201	-				+0.0
2,864,201	-				-0.8
2,864,201	-				-1.0
2,864,203	+				-1.4
2,864,203	+				+0.1
2,864,203	+				-0.9
2,864,211	-				-0.4
2,864,211	-				-0.6
2,864,212	+				+0.3
2,864,213	+				+0.0
2,864,213	+				+0.5
2,864,213	+				+0.1
2,864,213	+				+0.4
2,864,213	+				-0.9
2,864,213	+				-0.4
2,864,213	+				-1.0
2,864,213	+				-1.0
2,864,213	+				+0.4
2,864,213	+				+0.7
2,864,213	+				+0.1
2,864,213	+				+0.7
2,864,213	+				+0.2
2,864,213	+				+0.0
2,864,213	+				+0.6
2,864,213	+				+0.1
2,864,217	+				+0.0
2,864,221	-				+0.6
2,864,221	-				+0.4
2,864,221	-				+0.6
2,864,221	-				-0.3
2,864,221	-				-0.3
2,864,221	-				-0.7
2,864,221	-				-0.4
2,864,221	-				+0.1
2,864,221	-				+0.3
2,864,221	-				+1.3
2,864,221	-				-1.7
2,864,221	-				+0.7
2,864,221	-				-0.7
2,864,221	-				+0.1
2,864,221	-				-0.5
2,864,222	-				-0.1
2,864,224	+				-1.4
2,864,224	+				-1.5
2,864,224	+				+0.4
2,864,224	+				-0.5
2,864,224	+				-0.5
2,864,224	+				+0.6
2,864,224	+				-0.1
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