Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02853

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,005,948	-		CCNA_02852	0.42	-0.6
3,005,957	-		CCNA_02852	0.42	+0.6
3,005,957	-		CCNA_02852	0.42	+0.7
3,005,967	-		CCNA_02852	0.43	+0.5
3,005,986	+		CCNA_02852	0.44	-1.0
3,006,018	-		CCNA_02852	0.47	-0.3
3,006,021	+		CCNA_02852	0.47	-0.8
3,006,021	+		CCNA_02852	0.47	-0.5
3,006,029	-		CCNA_02852	0.47	-0.1
3,006,052	-		CCNA_02852	0.49	+0.3
3,006,052	-		CCNA_02852	0.49	+0.1
3,006,088	-		CCNA_02852	0.52	-0.8
3,006,088	-		CCNA_02852	0.52	-0.1
3,006,100	+		CCNA_02852	0.53	-0.6
3,006,158	+		CCNA_02852	0.57	-1.6
3,006,166	-		CCNA_02852	0.57	-0.1
3,006,203	-		CCNA_02852	0.60	+0.7
3,006,213	+		CCNA_02852	0.61	+0.2
3,006,222	-		CCNA_02852	0.62	+0.0
3,006,248	-		CCNA_02852	0.63	+0.8
3,006,255	-		CCNA_02852	0.64	-0.7
3,006,273	+		CCNA_02852	0.65	-0.1
3,006,281	-		CCNA_02852	0.66	+0.2
3,006,281	-		CCNA_02852	0.66	+0.9
3,006,294	-		CCNA_02852	0.67	-0.3
3,006,325	+		CCNA_02852	0.69	-0.8
3,006,328	-		CCNA_02852	0.69	+1.2
3,006,328	-		CCNA_02852	0.69	+0.7
3,006,347	-		CCNA_02852	0.71	+0.3
3,006,347	-		CCNA_02852	0.71	+0.3
3,006,366	+		CCNA_02852	0.72	+1.5
3,006,369	-		CCNA_02852	0.72	-1.2
3,006,369	-		CCNA_02852	0.72	+0.7
3,006,374	-		CCNA_02852	0.73	+1.3
3,006,383	+		CCNA_02852	0.73	+0.7
3,006,390	-		CCNA_02852	0.74	+0.4
3,006,398	-		CCNA_02852	0.74	-0.7
3,006,411	+		CCNA_02852	0.75	-1.1
3,006,419	-		CCNA_02852	0.76	+0.5
3,006,419	-		CCNA_02852	0.76	+1.2
3,006,484	-		CCNA_02852	0.81	+1.4
3,006,487	+		CCNA_02852	0.81	+0.1
3,006,595	-		CCNA_02852	0.89	+0.2
3,006,620	+				+0.6
3,006,625	+				-1.3
3,006,625	+				-0.1
3,006,625	+				+0.6
3,006,625	+				-1.5
3,006,625	+				-0.8
3,006,625	+				+2.3
3,006,625	+				-0.2
3,006,625	+				+1.1
3,006,625	+				-1.8
3,006,625	+				-2.0
3,006,625	+				+1.2
3,006,625	+				-1.5
3,006,625	+				+0.4
3,006,625	+				+0.6
3,006,625	+				-0.2
3,006,625	+				-0.9
3,006,625	+				-1.2
3,006,625	+				-0.8
3,006,625	+				-1.7
3,006,633	-				+0.8
3,006,633	-				+0.8
3,006,633	-				-0.4
3,006,633	-				+0.6
3,006,633	-				-1.2
3,006,633	-				-0.8
3,006,633	-				-0.2
3,006,633	-				+1.0
3,006,633	-				+0.2
3,006,633	-				+0.3
3,006,633	-				+0.2
3,006,633	-				-0.3
3,006,633	-				+1.0
3,006,633	-				-0.7
3,006,633	-				+0.1
3,006,633	-				-0.2
3,006,633	-				+0.2
3,006,633	-				-0.2
3,006,633	-				+1.1
3,006,633	-				+0.6
3,006,633	-				+0.5
3,006,657	+				-2.6
3,006,677	-				-1.2
3,006,712	-				-0.5
3,006,716	-				+0.4
3,006,733	-				+0.3
3,006,741	+				-0.1
3,006,764	+				-0.5
3,006,772	-				-0.1
3,006,816	-				+0.3
3,006,844	+				-0.4
3,006,869	+				+0.5
3,006,884	-				-0.4
3,006,886	+				+0.8
3,006,908	+				-1.5
3,006,924	+				-0.6
3,006,924	+				-0.5
3,006,924	+				-0.1
3,006,924	+				-0.2
3,006,929	+				-0.5
3,006,932	-				+0.8
3,006,932	-				+0.4
3,006,932	-				+0.8
3,006,934	+				-3.1
3,006,937	-				-0.4
3,006,969	+				+0.5
3,006,991	-				-2.3
3,007,020	+				+0.3
3,007,022	-				-1.4
3,007,047	+				+0.3
3,007,071	-		CCNA_02853	0.12	-0.7
3,007,080	-		CCNA_02853	0.12	-1.5
3,007,106	-		CCNA_02853	0.14	-1.0
3,007,111	-		CCNA_02853	0.14	-1.3
3,007,127	-		CCNA_02853	0.16	-0.8
3,007,127	-		CCNA_02853	0.16	-0.6
3,007,127	-		CCNA_02853	0.16	-0.1
3,007,204	+		CCNA_02853	0.21	-0.3
3,007,212	-		CCNA_02853	0.22	+0.6
3,007,225	-		CCNA_02853	0.23	-1.0
3,007,225	-		CCNA_02853	0.23	-0.6
3,007,253	+		CCNA_02853	0.25	+0.6
3,007,253	+		CCNA_02853	0.25	-0.4
3,007,253	+		CCNA_02853	0.25	-0.4
3,007,253	+		CCNA_02853	0.25	-0.4
3,007,258	-		CCNA_02853	0.25	-0.5
3,007,261	-		CCNA_02853	0.25	-2.0
3,007,261	-				-1.5
3,007,294	+		CCNA_02853	0.28	-1.1
3,007,302	-		CCNA_02853	0.28	+0.5
3,007,374	-		CCNA_02853	0.33	-0.3
3,007,429	-		CCNA_02853	0.37	-0.0
3,007,431	+		CCNA_02853	0.37	-0.5
3,007,432	+		CCNA_02853	0.37	-2.0
3,007,453	+		CCNA_02853	0.39	-1.1
3,007,455	-		CCNA_02853	0.39	-1.2
3,007,523	+		CCNA_02853	0.44	-0.4
3,007,554	+		CCNA_02853	0.46	-2.7
3,007,570	-		CCNA_02853	0.47	+0.0
3,007,624	-		CCNA_02853	0.51	-1.1
3,007,629	-		CCNA_02853	0.52	-0.0
3,007,700	+		CCNA_02853	0.57	-0.0
3,007,739	-		CCNA_02853	0.59	+0.0
3,007,765	+		CCNA_02853	0.61	+0.6
3,007,765	-		CCNA_02853	0.61	-1.9
3,007,783	-		CCNA_02853	0.63	-1.5
3,007,783	-		CCNA_02853	0.63	-1.5
3,007,820	-		CCNA_02853	0.65	-0.6
3,007,838	+		CCNA_02853	0.66	-1.5
3,007,846	-		CCNA_02853	0.67	+0.1
3,007,856	-		CCNA_02853	0.68	-0.1
3,007,890	+		CCNA_02853	0.70	-0.1
3,007,890	+		CCNA_02853	0.70	-1.0
3,007,892	+		CCNA_02853	0.70	+1.2
3,007,893	-		CCNA_02853	0.70	-0.6
3,007,929	-		CCNA_02853	0.73	-0.1
3,007,936	+		CCNA_02853	0.73	-0.0
3,008,028	-		CCNA_02853	0.80	-1.1
3,008,042	-		CCNA_02853	0.81	-0.9
3,008,044	+		CCNA_02853	0.81	-1.5
3,008,050	-		CCNA_02853	0.82	-2.3
3,008,052	-		CCNA_02853	0.82	+0.0
3,008,067	-		CCNA_02853	0.83	-0.2
3,008,067	-		CCNA_02853	0.83	-0.1
3,008,127	-		CCNA_02853	0.87	-0.4
3,008,139	-		CCNA_02853	0.88	-1.1
3,008,201	-				+1.2
3,008,221	-				-0.4
3,008,258	+				-1.4
3,008,299	+				+0.1
3,008,339	-				-0.1
3,008,341	+				-0.9
3,008,342	+				-1.0
3,008,342	+				-0.3
3,008,342	+				+1.5
3,008,350	-				+0.4
3,008,354	+				-1.2
3,008,363	-				+0.4
3,008,363	-				+0.2
3,008,370	-				+0.7
3,008,370	-				+0.9
3,008,375	+				+0.8
3,008,379	+				-2.7
3,008,379	+				-1.3
3,008,392	-				+0.6
3,008,397	+				+0.8
3,008,407	+				-1.6
3,008,414	+				-0.1
3,008,415	-				+0.4
3,008,421	-				+0.7
3,008,492	+				+0.4
3,008,492	+				-0.8
3,008,500	-				+0.0
3,008,541	-		CCNA_02854	0.15	-0.6
3,008,549	-		CCNA_02854	0.17	-1.0
3,008,557	-		CCNA_02854	0.18	-0.2
3,008,595	+		CCNA_02854	0.23	-0.8
3,008,603	-		CCNA_02854	0.24	-0.7
3,008,608	-		CCNA_02854	0.25	-0.9
3,008,650	+		CCNA_02854	0.31	-2.2
3,008,700	-		CCNA_02854	0.39	-0.8
3,008,764	+		CCNA_02854	0.48	+0.2
3,008,887	-		CCNA_02854	0.66	-0.7
3,008,902	-		CCNA_02854	0.69	-0.7
3,008,939	-		CCNA_02854	0.74	-0.3
3,008,953	-		CCNA_02854	0.76	-0.2
3,008,992	-		CCNA_02854	0.82	-0.0
3,009,001	+		CCNA_02854	0.83	-0.4
3,009,004	-		CCNA_02854	0.84	-0.0
3,009,061	-				-1.0
3,009,099	-				-0.6
3,009,130	-				+0.6
3,009,130	-				+0.4
3,009,130	-				+0.8