Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02351

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
2,488,999	+		CCNA_02349	0.64	+0.4
2,489,009	-		CCNA_02349	0.65	-0.2
2,489,009	-		CCNA_02349	0.65	-1.3
2,489,024	+		CCNA_02349	0.67	+0.3
2,489,067	+		CCNA_02349	0.71	-0.6
2,489,087	-		CCNA_02349	0.74	-1.0
2,489,177	+		CCNA_02349	0.84	+0.3
2,489,177	+		CCNA_02349	0.84	+0.5
2,489,177	+		CCNA_02349	0.84	-0.9
2,489,177	+		CCNA_02349	0.84	+0.3
2,489,177	+		CCNA_02349	0.84	+0.5
2,489,185	-		CCNA_02349	0.84	-0.5
2,489,211	+		CCNA_02349	0.87	-0.1
2,489,225	-		CCNA_02349	0.89	+0.2
2,489,238	+				+1.1
2,489,257	+				-0.2
2,489,279	-				-1.3
2,489,314	-				+0.4
2,489,316	-				+0.7
2,489,318	+				+0.2
2,489,318	+				+0.2
2,489,318	+				+0.0
2,489,318	+				-0.2
2,489,318	+				+0.3
2,489,318	+				-0.1
2,489,318	+				+0.7
2,489,318	+				+0.5
2,489,318	+				+1.0
2,489,326	-				-0.7
2,489,326	-				+1.4
2,489,326	-				-0.0
2,489,326	-				+0.5
2,489,326	-				-0.5
2,489,326	-				-0.9
2,489,326	-				-2.1
2,489,326	-				-0.3
2,489,326	-				-0.3
2,489,336	-				+0.4
2,489,350	-				-0.2
2,489,423	-		CCNA_02350	0.14	-0.3
2,489,482	-		CCNA_02350	0.29	-0.0
2,489,492	-		CCNA_02350	0.32	-0.4
2,489,513	-		CCNA_02350	0.37	+1.7
2,489,541	-		CCNA_02350	0.44	+0.5
2,489,570	+		CCNA_02350	0.51	-0.2
2,489,622	+		CCNA_02350	0.64	+0.4
2,489,630	-		CCNA_02350	0.66	+0.7
2,489,645	+		CCNA_02350	0.70	+0.8
2,489,653	-		CCNA_02350	0.72	+2.1
2,489,663	+		CCNA_02350	0.74	-1.4
2,489,720	-		CCNA_02350	0.89	+0.1
2,489,723	+		CCNA_02350	0.89	+0.2
2,489,731	-				+0.0
2,489,738	-				-1.4
2,489,783	-				+0.3
2,489,823	+				+2.1
2,489,827	-				-0.5
2,489,831	-				-0.2
2,489,861	+				+0.6
2,489,894	-				+0.6
2,490,037	+		CCNA_02351	0.16	+0.1
2,490,056	-		CCNA_02351	0.19	+0.2
2,490,111	-		CCNA_02351	0.28	-0.1
2,490,175	-		CCNA_02351	0.38	+0.4
2,490,203	+		CCNA_02351	0.42	-0.3
2,490,214	+		CCNA_02351	0.44	-0.3
2,490,232	-		CCNA_02351	0.47	-0.3
2,490,232	-		CCNA_02351	0.47	+1.2
2,490,250	+		CCNA_02351	0.50	+1.1
2,490,293	-		CCNA_02351	0.57	-0.2
2,490,317	+		CCNA_02351	0.60	+0.7
2,490,325	-		CCNA_02351	0.62	+1.1
2,490,325	-		CCNA_02351	0.62	+0.2
2,490,325	-		CCNA_02351	0.62	+0.9
2,490,325	-		CCNA_02351	0.62	+0.2
2,490,325	-		CCNA_02351	0.62	+0.1
2,490,325	-		CCNA_02351	0.62	-0.0
2,490,325	-		CCNA_02351	0.62	-0.1
2,490,325	-		CCNA_02351	0.62	+1.0
2,490,334	+		CCNA_02351	0.63	-0.4
2,490,375	+		CCNA_02351	0.70	+0.2
2,490,383	-		CCNA_02351	0.71	+0.6
2,490,396	+		CCNA_02351	0.73	-0.9
2,490,396	+		CCNA_02351	0.73	+0.9
2,490,436	+		CCNA_02351	0.79	+0.5
2,490,441	+		CCNA_02351	0.80	+0.2
2,490,496	-		CCNA_02351	0.89	+0.9
2,490,519	+				-0.2
2,490,525	+				+0.5
2,490,528	-				+0.4
2,490,528	-				+0.1
2,490,571	+				-0.8
2,490,576	+				-0.7
2,490,600	+				-0.1
2,490,606	-				+0.2
2,490,633	-				+0.5
2,490,645	+				+0.7
2,490,653	-				+0.6
2,490,678	+				-0.1
2,490,686	-				-1.1
2,490,686	-				+0.5
2,490,686	-				+0.2
2,490,691	-				+0.0
2,490,691	-				+0.1
2,490,718	+				-1.9
2,490,732	-				+0.3
2,490,748	+				+0.0
2,490,823	-				+0.2
2,490,839	+		CCNA_02352	0.10	-0.7
2,490,906	-		CCNA_02352	0.13	+0.4
2,490,944	+		CCNA_02352	0.15	+0.4
2,490,945	+		CCNA_02352	0.15	+1.4
2,490,945	+		CCNA_02352	0.15	-0.6
2,490,945	+		CCNA_02352	0.15	-0.2
2,490,952	-		CCNA_02352	0.15	-0.0
2,490,953	-		CCNA_02352	0.15	-0.6
2,490,953	-		CCNA_02352	0.15	+0.3
2,490,953	-		CCNA_02352	0.15	+0.2
2,490,972	-		CCNA_02352	0.16	-0.1
2,490,974	+		CCNA_02352	0.16	+0.1
2,490,976	+		CCNA_02352	0.17	+0.3
2,490,982	-		CCNA_02352	0.17	-0.9
2,491,010	+		CCNA_02352	0.18	-2.8
2,491,010	+		CCNA_02352	0.18	+0.3
2,491,018	-		CCNA_02352	0.18	+0.3
2,491,018	-		CCNA_02352	0.18	+1.7
2,491,018	-		CCNA_02352	0.18	+0.2
2,491,019	+		CCNA_02352	0.18	+0.0
2,491,020	+		CCNA_02352	0.19	-0.6
2,491,037	+		CCNA_02352	0.19	+1.5
2,491,037	+		CCNA_02352	0.19	+0.1
2,491,042	+		CCNA_02352	0.20	-1.6
2,491,044	+		CCNA_02352	0.20	+0.4
2,491,045	-		CCNA_02352	0.20	-0.2
2,491,045	-		CCNA_02352	0.20	+0.2
2,491,052	-		CCNA_02352	0.20	+0.5
2,491,072	+		CCNA_02352	0.21	-0.9
2,491,102	+		CCNA_02352	0.22	+0.3
2,491,102	+		CCNA_02352	0.22	-0.9
2,491,102	-		CCNA_02352	0.22	+0.3
2,491,109	+		CCNA_02352	0.23	-0.0
2,491,110	-		CCNA_02352	0.23	+0.9
2,491,127	-		CCNA_02352	0.23	+0.5
2,491,134	+		CCNA_02352	0.24	-1.1
2,491,136	-		CCNA_02352	0.24	+0.3
2,491,142	-		CCNA_02352	0.24	+0.2
2,491,174	-		CCNA_02352	0.26	+0.4
2,491,174	-		CCNA_02352	0.26	+0.6
2,491,174	-		CCNA_02352	0.26	-0.2
2,491,240	-		CCNA_02352	0.29	-1.2
2,491,245	-		CCNA_02352	0.29	-1.1
2,491,300	-		CCNA_02352	0.31	+0.4
2,491,374	+		CCNA_02352	0.35	-0.5
2,491,384	-		CCNA_02352	0.35	+0.3
2,491,415	+		CCNA_02352	0.37	-0.2
2,491,442	-		CCNA_02352	0.38	+0.2
2,491,509	-		CCNA_02352	0.41	+0.3
2,491,520	-		CCNA_02352	0.42	+0.2
2,491,533	+		CCNA_02352	0.42	-0.3
2,491,533	+		CCNA_02352	0.42	+0.2
2,491,533	+		CCNA_02352	0.42	+0.0
2,491,541	-		CCNA_02352	0.42	+0.2
2,491,541	-		CCNA_02352	0.42	-0.2