Experiment: Sucrose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0288 and Dshi_0289 are separated by 13 nucleotides Dshi_0289 and Dshi_0290 are separated by 150 nucleotides Dshi_0290 and Dshi_0291 are separated by 572 nucleotides
Dshi_0288: Dshi_0288 - ribosomal protein S3 (RefSeq), at 286,917 to 287,639
_0288
Dshi_0289: Dshi_0289 - ribosomal protein L16 (RefSeq), at 287,653 to 288,066
_0289
Dshi_0290: Dshi_0290 - hypothetical protein (RefSeq), at 288,217 to 288,447
_0290
Dshi_0291: Dshi_0291 - hypothetical protein (RefSeq), at 289,020 to 289,409
_0291
Position (kb) 288
289 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 288.193 kb on + strand at 288.203 kb on - strand at 288.290 kb on + strand, within Dshi_0290 at 288.290 kb on + strand, within Dshi_0290 at 288.298 kb on + strand, within Dshi_0290 at 288.298 kb on + strand, within Dshi_0290 at 288.299 kb on + strand, within Dshi_0290 at 288.305 kb on + strand, within Dshi_0290 at 288.305 kb on + strand, within Dshi_0290 at 288.305 kb on + strand, within Dshi_0290 at 288.305 kb on + strand, within Dshi_0290 at 288.305 kb on + strand, within Dshi_0290 at 288.305 kb on + strand, within Dshi_0290 at 288.305 kb on + strand, within Dshi_0290 at 288.308 kb on - strand, within Dshi_0290 at 288.308 kb on - strand, within Dshi_0290 at 288.313 kb on - strand, within Dshi_0290 at 288.313 kb on - strand, within Dshi_0290 at 288.313 kb on - strand, within Dshi_0290 at 288.313 kb on - strand, within Dshi_0290 at 288.313 kb on - strand, within Dshi_0290 at 288.361 kb on - strand, within Dshi_0290 at 288.401 kb on + strand, within Dshi_0290 at 288.405 kb on - strand, within Dshi_0290 at 288.431 kb on - strand at 288.449 kb on + strand at 288.454 kb on + strand at 288.471 kb on - strand at 288.475 kb on + strand at 288.475 kb on + strand at 288.520 kb on - strand at 288.522 kb on + strand at 288.527 kb on + strand at 288.529 kb on + strand at 288.529 kb on - strand at 288.536 kb on + strand at 288.542 kb on + strand at 288.542 kb on + strand at 288.548 kb on + strand at 288.561 kb on - strand at 288.569 kb on + strand at 288.582 kb on + strand at 288.582 kb on + strand at 288.590 kb on - strand at 288.590 kb on - strand at 288.607 kb on - strand at 288.631 kb on + strand at 288.631 kb on + strand at 288.631 kb on + strand at 288.646 kb on + strand at 288.646 kb on + strand at 288.646 kb on + strand at 288.657 kb on + strand at 288.661 kb on + strand at 288.662 kb on - strand at 288.665 kb on - strand at 288.665 kb on - strand at 288.668 kb on + strand at 288.668 kb on + strand at 288.673 kb on + strand at 288.676 kb on - strand at 288.676 kb on - strand at 288.676 kb on - strand at 288.676 kb on - strand at 288.725 kb on + strand at 288.725 kb on + strand at 288.725 kb on + strand at 288.725 kb on + strand at 288.733 kb on - strand at 288.733 kb on - strand at 288.794 kb on - strand at 288.818 kb on + strand at 288.818 kb on + strand at 288.818 kb on + strand at 288.823 kb on + strand at 288.826 kb on - strand at 288.826 kb on - strand at 288.826 kb on - strand at 288.826 kb on - strand at 288.828 kb on + strand at 288.828 kb on + strand at 288.828 kb on + strand at 288.828 kb on + strand at 288.828 kb on + strand at 288.828 kb on + strand at 288.828 kb on + strand at 288.833 kb on + strand at 288.836 kb on - strand at 288.836 kb on - strand at 288.836 kb on - strand at 288.836 kb on - strand at 288.836 kb on - strand at 288.837 kb on + strand at 288.838 kb on + strand at 288.838 kb on + strand at 288.846 kb on - strand at 288.846 kb on - strand at 288.846 kb on - strand at 288.851 kb on - strand at 288.862 kb on + strand at 288.870 kb on + strand at 288.870 kb on + strand at 288.870 kb on - strand at 288.870 kb on - strand at 288.877 kb on - strand at 288.909 kb on + strand at 288.909 kb on + strand at 288.915 kb on - strand at 288.950 kb on + strand at 289.000 kb on - strand at 289.001 kb on - strand at 289.003 kb on + strand at 289.003 kb on + strand at 289.003 kb on + strand at 289.003 kb on + strand at 289.011 kb on - strand at 289.011 kb on - strand at 289.011 kb on - strand at 289.011 kb on - strand at 289.011 kb on - strand at 289.015 kb on + strand at 289.017 kb on + strand at 289.017 kb on + strand at 289.023 kb on - strand at 289.025 kb on - strand at 289.057 kb on + strand at 289.071 kb on + strand, within Dshi_0291 at 289.071 kb on + strand, within Dshi_0291 at 289.074 kb on - strand, within Dshi_0291 at 289.079 kb on + strand, within Dshi_0291 at 289.079 kb on + strand, within Dshi_0291 at 289.087 kb on + strand, within Dshi_0291 at 289.095 kb on - strand, within Dshi_0291 at 289.095 kb on - strand, within Dshi_0291 at 289.137 kb on + strand, within Dshi_0291 at 289.140 kb on - strand, within Dshi_0291 at 289.140 kb on - strand, within Dshi_0291 at 289.145 kb on - strand, within Dshi_0291 at 289.166 kb on + strand, within Dshi_0291 at 289.169 kb on - strand, within Dshi_0291 at 289.176 kb on + strand, within Dshi_0291 at 289.179 kb on - strand, within Dshi_0291 at 289.196 kb on + strand, within Dshi_0291 at 289.204 kb on - strand, within Dshi_0291 at 289.216 kb on - strand, within Dshi_0291 at 289.295 kb on - strand, within Dshi_0291 at 289.335 kb on - strand, within Dshi_0291 at 289.379 kb on - strand at 289.394 kb on + strand at 289.438 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) remove 288,193 + -0.4 288,203 - +1.1 288,290 + Dshi_0290 0.32 +0.2 288,290 + Dshi_0290 0.32 +0.1 288,298 + Dshi_0290 0.35 +0.7 288,298 + Dshi_0290 0.35 +0.1 288,299 + Dshi_0290 0.35 +0.5 288,305 + Dshi_0290 0.38 +0.9 288,305 + Dshi_0290 0.38 +2.1 288,305 + Dshi_0290 0.38 +0.2 288,305 + Dshi_0290 0.38 +0.7 288,305 + Dshi_0290 0.38 +0.1 288,305 + Dshi_0290 0.38 -0.6 288,305 + Dshi_0290 0.38 +0.9 288,308 - Dshi_0290 0.39 +0.0 288,308 - Dshi_0290 0.39 -0.1 288,313 - Dshi_0290 0.42 +1.7 288,313 - Dshi_0290 0.42 +0.8 288,313 - Dshi_0290 0.42 +0.9 288,313 - Dshi_0290 0.42 +0.1 288,313 - Dshi_0290 0.42 +0.4 288,361 - Dshi_0290 0.62 -0.2 288,401 + Dshi_0290 0.80 -0.1 288,405 - Dshi_0290 0.81 +0.7 288,431 - +0.6 288,449 + +2.5 288,454 + +0.2 288,471 - +1.6 288,475 + +0.7 288,475 + +0.5 288,520 - +0.3 288,522 + +0.9 288,527 + -0.4 288,529 + +0.5 288,529 - -0.5 288,536 + -0.1 288,542 + -1.1 288,542 + +0.2 288,548 + -0.0 288,561 - +0.0 288,569 + +0.3 288,582 + +0.1 288,582 + -1.4 288,590 - -0.4 288,590 - -0.1 288,607 - -0.6 288,631 + +0.3 288,631 + +0.7 288,631 + +0.1 288,646 + +1.9 288,646 + -1.1 288,646 + +0.1 288,657 + +0.2 288,661 + -0.1 288,662 - +0.3 288,665 - +0.5 288,665 - +0.4 288,668 + +0.1 288,668 + +0.1 288,673 + +1.1 288,676 - +0.3 288,676 - +0.6 288,676 - -0.4 288,676 - +0.1 288,725 + +0.8 288,725 + +0.7 288,725 + -0.8 288,725 + -0.2 288,733 - +0.7 288,733 - +0.9 288,794 - +0.6 288,818 + +0.6 288,818 + +1.3 288,818 + +0.3 288,823 + +0.3 288,826 - +0.2 288,826 - +0.3 288,826 - +0.1 288,826 - -1.3 288,828 + +0.7 288,828 + +0.5 288,828 + -0.0 288,828 + -0.2 288,828 + +1.2 288,828 + -0.1 288,828 + -2.7 288,833 + +0.7 288,836 - +0.6 288,836 - +0.4 288,836 - +0.0 288,836 - +0.7 288,836 - -0.4 288,837 + +0.7 288,838 + +0.6 288,838 + +0.7 288,846 - +1.2 288,846 - +1.9 288,846 - +0.3 288,851 - +0.6 288,862 + +1.5 288,870 + -0.5 288,870 + +1.6 288,870 - +1.2 288,870 - -1.1 288,877 - -2.0 288,909 + -1.9 288,909 + +0.5 288,915 - -0.3 288,950 + +0.7 289,000 - +0.4 289,001 - +0.7 289,003 + +0.1 289,003 + -0.1 289,003 + +0.2 289,003 + +0.8 289,011 - +0.3 289,011 - +1.0 289,011 - +0.6 289,011 - +0.2 289,011 - -0.1 289,015 + +4.2 289,017 + -0.3 289,017 + -0.5 289,023 - +0.2 289,025 - +0.4 289,057 + +0.9 289,071 + Dshi_0291 0.13 +0.8 289,071 + Dshi_0291 0.13 +1.9 289,074 - Dshi_0291 0.14 +0.6 289,079 + Dshi_0291 0.15 +0.9 289,079 + Dshi_0291 0.15 +1.4 289,087 + Dshi_0291 0.17 +0.6 289,095 - Dshi_0291 0.19 -0.1 289,095 - Dshi_0291 0.19 +0.9 289,137 + Dshi_0291 0.30 -0.6 289,140 - Dshi_0291 0.31 +0.5 289,140 - Dshi_0291 0.31 -1.4 289,145 - Dshi_0291 0.32 -0.0 289,166 + Dshi_0291 0.37 +0.4 289,169 - Dshi_0291 0.38 +1.5 289,176 + Dshi_0291 0.40 +0.5 289,179 - Dshi_0291 0.41 +0.3 289,196 + Dshi_0291 0.45 -0.4 289,204 - Dshi_0291 0.47 +0.2 289,216 - Dshi_0291 0.50 -1.7 289,295 - Dshi_0291 0.71 +1.0 289,335 - Dshi_0291 0.81 +1.6 289,379 - +0.4 289,394 + +0.3 289,438 + +0.5
Or see this region's nucleotide sequence