Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32180

Experiment: L-Tryptophan (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Tryptophan (N)
3,373,861	-		PGA1_c32160	0.51	+0.3
3,373,869	+		PGA1_c32160	0.52	-0.3
3,373,959	+		PGA1_c32160	0.62	+0.2
3,373,993	+		PGA1_c32160	0.66	+0.3
3,374,008	+		PGA1_c32160	0.67	-0.1
3,374,008	+		PGA1_c32160	0.67	+0.4
3,374,016	-		PGA1_c32160	0.68	-0.6
3,374,085	-		PGA1_c32160	0.76	-0.4
3,374,114	+		PGA1_c32160	0.79	-0.3
3,374,114	+		PGA1_c32160	0.79	-0.5
3,374,197	-		PGA1_c32160	0.88	-1.4
3,374,300	+				+0.5
3,374,373	+				+0.3
3,374,439	+				-0.9
3,374,510	+				-0.2
3,374,510	+				+0.1
3,374,510	+				-0.4
3,374,510	+				-0.3
3,374,510	+				+0.7
3,374,510	+				-0.1
3,374,510	+				-0.2
3,374,510	+				+0.5
3,374,510	+				+0.7
3,374,510	+				+2.1
3,374,510	+				+0.3
3,374,510	+				-0.6
3,374,510	+				-0.7
3,374,510	+				-0.3
3,374,510	+				-0.1
3,374,510	+				+0.4
3,374,510	+				+0.1
3,374,510	+				-0.1
3,374,510	+				-0.0
3,374,510	+				+0.9
3,374,510	+				-0.0
3,374,510	+				+0.5
3,374,510	+				-0.8
3,374,510	+				+0.4
3,374,510	+				+0.3
3,374,510	+				+1.0
3,374,510	+				+0.7
3,374,510	+				+2.4
3,374,510	+				+0.5
3,374,510	+				+0.8
3,374,510	+				+0.5
3,374,510	+				+0.7
3,374,510	+				+0.4
3,374,510	+				+0.3
3,374,510	+				+0.5
3,374,510	+				+0.5
3,374,510	+				-1.6
3,374,510	+				-0.2
3,374,510	+				+0.3
3,374,518	+				-1.1
3,374,518	-				+0.2
3,374,518	-				-0.6
3,374,518	-				+0.4
3,374,518	-				+1.2
3,374,518	-				+0.3
3,374,518	-				+0.3
3,374,518	-				+0.2
3,374,518	-				-0.6
3,374,518	-				-1.1
3,374,518	-				+0.8
3,374,518	-				-0.3
3,374,518	-				-0.1
3,374,518	-				+1.1
3,374,518	-				+0.1
3,374,518	-				+0.7
3,374,518	-				+1.1
3,374,518	-				+0.1
3,374,518	-				+0.5
3,374,518	-				-1.1
3,374,518	-				-0.2
3,374,518	-				+0.8
3,374,518	-				+0.4
3,374,518	-				-0.3
3,374,518	-				+0.3
3,374,518	-				-2.3
3,374,518	-				-1.3
3,374,518	-				+0.3
3,374,518	-				+1.1
3,374,518	-				+2.1
3,374,518	-				-1.3
3,374,518	-				-0.7
3,374,518	-				-0.0
3,374,518	-				-0.8
3,374,518	-				+1.9
3,374,518	-				+1.9
3,374,518	-				+0.5
3,374,518	-				-0.7
3,374,518	-				-0.5
3,374,518	-				+0.0
3,374,518	-				+0.3
3,374,518	-				-0.8
3,374,518	-				-0.3
3,374,518	-				+0.7
3,374,518	-				+0.3
3,374,518	-				+0.9
3,374,518	-				+0.5
3,374,518	-				+1.5
3,374,518	-				-0.5
3,374,518	-				+0.1
3,374,518	-				-0.3
3,374,518	-				+0.1
3,374,518	-				+0.2
3,374,518	-				+0.2
3,374,518	-				-0.2
3,374,518	-				-0.6
3,374,518	-				+0.5
3,374,518	-				+1.1
3,374,518	-				+0.9
3,374,518	-				+1.4
3,374,518	-				-1.2
3,374,518	-				-0.7
3,374,518	-				+0.8
3,374,518	-				+0.2
3,374,518	-				-0.3
3,374,518	-				+1.1
3,374,518	-				-1.9
3,374,518	-				+1.0
3,374,518	-				-0.6
3,374,518	-				-0.5
3,374,518	-				-0.1
3,374,518	-				-2.1
3,374,518	-				+0.2
3,374,518	-				+0.0
3,374,518	-				-0.5
3,374,518	-				-1.6
3,374,518	-				-1.7
3,374,519	-				+0.0
3,374,523	+				+3.1
3,374,526	-				+0.5
3,374,531	-				-1.4
3,374,532	+				+0.4
3,374,534	+				-0.2
3,374,536	-				-0.2
3,374,544	+				-0.5
3,374,551	+				+1.8
3,374,551	+				+0.0
3,374,572	-				+1.1
3,374,589	+		PGA1_c32170	0.13	+2.0
3,374,608	+		PGA1_c32170	0.22	+0.3
3,374,638	-		PGA1_c32170	0.36	+0.3
3,374,644	+		PGA1_c32170	0.39	+0.7
3,374,644	+		PGA1_c32170	0.39	+1.7
3,374,649	+		PGA1_c32170	0.41	+0.3
3,374,652	-		PGA1_c32170	0.43	+0.1
3,374,667	+		PGA1_c32170	0.50	+0.8
3,374,685	-		PGA1_c32170	0.59	+0.0
3,374,779	+				+0.3
3,374,784	+				+1.1
3,374,784	+				+1.9
3,374,797	+				-0.3
3,374,797	+				-0.5
3,374,797	+				+1.5
3,374,797	+				-0.2
3,374,797	+				-0.3
3,374,832	+				+1.1
3,374,832	+				-0.6
3,374,832	+				+0.7
3,374,832	+				+1.0
3,374,832	+				+0.3
3,374,832	+				+0.3
3,374,832	+				+0.3
3,374,832	+				+0.5
3,374,832	+				-0.3
3,374,840	-				+1.7
3,374,840	-				+0.1
3,374,840	-				+0.8
3,374,840	-				+0.2
3,374,879	+		PGA1_c32180	0.10	+0.4
3,374,995	-		PGA1_c32180	0.22	-0.0
3,375,033	-		PGA1_c32180	0.26	+0.7
3,375,039	-		PGA1_c32180	0.27	+0.8
3,375,079	+		PGA1_c32180	0.31	+0.7
3,375,087	-		PGA1_c32180	0.31	-0.2
3,375,087	-		PGA1_c32180	0.31	+0.5
3,375,087	-		PGA1_c32180	0.31	+0.8
3,375,096	+		PGA1_c32180	0.32	+0.5
3,375,096	+		PGA1_c32180	0.32	+1.6
3,375,153	+		PGA1_c32180	0.38	+0.2
3,375,182	-		PGA1_c32180	0.41	-0.0
3,375,235	-		PGA1_c32180	0.46	+1.3
3,375,277	-		PGA1_c32180	0.51	+0.3
3,375,287	+		PGA1_c32180	0.52	+1.2
3,375,378	+		PGA1_c32180	0.61	+0.7
3,375,487	-		PGA1_c32180	0.72	+0.5
3,375,551	-		PGA1_c32180	0.78	+1.5
3,375,567	-		PGA1_c32180	0.80	+0.5
3,375,586	+		PGA1_c32180	0.82	-0.0
3,375,619	-		PGA1_c32180	0.85	-1.1
3,375,684	-				+0.7
3,375,791	+				-0.1
3,375,820	+				+0.5
3,375,824	-				-0.9
3,375,870	-				-0.4
3,375,877	+				-0.9
3,375,885	-				-0.3
3,375,934	-				+0.2
3,376,024	-		PGA1_c32190	0.20	-1.3
3,376,072	-		PGA1_c32190	0.26	-1.1
3,376,101	+		PGA1_c32190	0.30	+0.5
3,376,101	+		PGA1_c32190	0.30	+0.7
3,376,101	+		PGA1_c32190	0.30	+1.5
3,376,104	-		PGA1_c32190	0.30	+0.4
3,376,109	-		PGA1_c32190	0.31	+0.3
3,376,109	-		PGA1_c32190	0.31	+1.7
3,376,109	-		PGA1_c32190	0.31	-0.3
3,376,111	+		PGA1_c32190	0.31	+2.0
3,376,111	+		PGA1_c32190	0.31	+0.0
3,376,125	-		PGA1_c32190	0.33	-1.2
3,376,184	+		PGA1_c32190	0.40	+1.1
3,376,200	-		PGA1_c32190	0.42	-1.8
3,376,217	+		PGA1_c32190	0.45	+0.7
3,376,224	+		PGA1_c32190	0.45	-0.8
3,376,225	-		PGA1_c32190	0.46	+0.3
3,376,228	+		PGA1_c32190	0.46	-1.1
3,376,233	-		PGA1_c32190	0.47	+0.0
3,376,294	+		PGA1_c32190	0.54	+0.6
3,376,303	-		PGA1_c32190	0.55	-0.1
3,376,400	+		PGA1_c32190	0.67	-0.7
3,376,427	+		PGA1_c32190	0.71	+0.0
3,376,470	-		PGA1_c32190	0.76	+1.0
3,376,470	-		PGA1_c32190	0.76	+0.3
3,376,470	-		PGA1_c32190	0.76	+0.8
3,376,512	+		PGA1_c32190	0.81	+0.4
3,376,512	+		PGA1_c32190	0.81	+0.6
3,376,520	-		PGA1_c32190	0.82	+0.4
3,376,520	-		PGA1_c32190	0.82	+0.0
3,376,520	-		PGA1_c32190	0.82	-0.9
3,376,533	+		PGA1_c32190	0.84	+0.2
3,376,538	-		PGA1_c32190	0.85	-1.1
3,376,541	-		PGA1_c32190	0.85	+1.1
3,376,541	-		PGA1_c32190	0.85	+0.3
3,376,554	+		PGA1_c32190	0.87	+1.6
3,376,562	-		PGA1_c32190	0.88	+0.9
3,376,610	+				+0.5
3,376,646	+				+1.2
3,376,646	+				-2.3
3,376,646	+				+0.9
3,376,647	-				-0.5
3,376,647	-				-0.8
3,376,647	-				-0.2
3,376,654	-				+0.8
3,376,654	-				+0.1
3,376,654	-				-0.5
3,376,720	-				+0.3
3,376,730	+				-0.9
3,376,758	-		PGA1_c32200	0.12	+2.1