Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23490

Experiment: L-Tryptophan (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Tryptophan (N)
2,443,355	+				+4.7
2,443,368	-				+4.4
2,443,428	+		PGA1_c23480	0.11	+4.7
2,443,428	+		PGA1_c23480	0.11	+5.4
2,443,659	+		PGA1_c23480	0.41	+3.0
2,444,016	+		PGA1_c23480	0.87	+1.9
2,444,024	-		PGA1_c23480	0.89	+2.3
2,444,024	-		PGA1_c23480	0.89	+0.9
2,444,118	+				+1.2
2,444,123	+				+0.0
2,444,131	-				-0.4
2,444,159	-				-0.6
2,444,160	-				+0.7
2,444,164	-				-1.0
2,444,225	+				+1.4
2,444,235	-				+1.2
2,444,249	-				+1.1
2,444,249	-				-0.4
2,444,255	+				-0.0
2,444,255	+				+2.1
2,444,260	+				-0.2
2,444,265	+				+0.0
2,444,268	-				+1.8
2,444,268	-				-1.3
2,444,301	+				+1.2
2,444,301	+				+0.4
2,444,402	-		PGA1_c23490	0.13	+1.0
2,444,414	+		PGA1_c23490	0.13	+0.8
2,444,419	+		PGA1_c23490	0.14	+0.3
2,444,421	+		PGA1_c23490	0.14	+0.2
2,444,424	-		PGA1_c23490	0.14	-0.2
2,444,487	-		PGA1_c23490	0.16	+0.8
2,444,488	+		PGA1_c23490	0.17	-1.3
2,444,499	+		PGA1_c23490	0.17	+0.5
2,444,506	-		PGA1_c23490	0.17	-0.1
2,444,563	+		PGA1_c23490	0.20	-0.0
2,444,581	+		PGA1_c23490	0.21	-0.5
2,444,685	+		PGA1_c23490	0.25	+0.8
2,444,693	-		PGA1_c23490	0.25	+0.4
2,444,719	-		PGA1_c23490	0.27	+0.1
2,444,720	-		PGA1_c23490	0.27	+1.1
2,444,733	+		PGA1_c23490	0.27	+1.4
2,444,790	-		PGA1_c23490	0.30	-1.3
2,444,832	+		PGA1_c23490	0.32	+0.7
2,444,850	-		PGA1_c23490	0.32	-1.3
2,444,931	+		PGA1_c23490	0.36	+0.5
2,444,957	+		PGA1_c23490	0.37	+0.6
2,445,018	+		PGA1_c23490	0.40	+0.9
2,445,051	+		PGA1_c23490	0.41	+0.5
2,445,059	-		PGA1_c23490	0.41	+2.0
2,445,061	+		PGA1_c23490	0.41	+1.0
2,445,061	+		PGA1_c23490	0.41	+1.3
2,445,069	-		PGA1_c23490	0.42	+1.1
2,445,076	+		PGA1_c23490	0.42	+0.8
2,445,092	+		PGA1_c23490	0.43	+0.9
2,445,139	+		PGA1_c23490	0.45	+0.1
2,445,139	+		PGA1_c23490	0.45	-0.9
2,445,139	+		PGA1_c23490	0.45	+0.4
2,445,139	+		PGA1_c23490	0.45	+0.3
2,445,139	+		PGA1_c23490	0.45	+0.7
2,445,139	+		PGA1_c23490	0.45	-0.3
2,445,147	-		PGA1_c23490	0.45	+0.7
2,445,147	-		PGA1_c23490	0.45	-0.8
2,445,147	-		PGA1_c23490	0.45	+0.0
2,445,147	-		PGA1_c23490	0.45	-0.5
2,445,147	-		PGA1_c23490	0.45	+1.2
2,445,147	-		PGA1_c23490	0.45	+1.0
2,445,147	-		PGA1_c23490	0.45	+0.1
2,445,152	-		PGA1_c23490	0.45	+0.3
2,445,213	+		PGA1_c23490	0.48	-1.5
2,445,287	+		PGA1_c23490	0.51	+0.7
2,445,336	+		PGA1_c23490	0.53	+0.9
2,445,336	+		PGA1_c23490	0.53	+1.0
2,445,336	+		PGA1_c23490	0.53	+0.6
2,445,349	-		PGA1_c23490	0.54	+0.1
2,445,392	+		PGA1_c23490	0.56	+1.2
2,445,392	+		PGA1_c23490	0.56	+0.5
2,445,392	+		PGA1_c23490	0.56	+1.7
2,445,392	+		PGA1_c23490	0.56	+2.5
2,445,400	-		PGA1_c23490	0.56	+2.5
2,445,400	-		PGA1_c23490	0.56	+0.6
2,445,455	+		PGA1_c23490	0.59	+0.6
2,445,496	+		PGA1_c23490	0.60	+0.2
2,445,528	+		PGA1_c23490	0.62	+0.4
2,445,528	+		PGA1_c23490	0.62	+2.1
2,445,536	-		PGA1_c23490	0.62	+0.1
2,445,593	-		PGA1_c23490	0.65	+0.1
2,445,686	+		PGA1_c23490	0.69	+1.6
2,445,694	-		PGA1_c23490	0.69	+1.3
2,445,777	+		PGA1_c23490	0.73	+0.1
2,445,777	+		PGA1_c23490	0.73	-0.2
2,445,777	+		PGA1_c23490	0.73	-0.0
2,445,777	+		PGA1_c23490	0.73	-0.5
2,445,777	+		PGA1_c23490	0.73	-0.6
2,445,777	+		PGA1_c23490	0.73	-0.7
2,445,777	+		PGA1_c23490	0.73	+1.0
2,445,780	-		PGA1_c23490	0.73	-2.5
2,445,785	-		PGA1_c23490	0.73	-1.2
2,445,855	-		PGA1_c23490	0.76	-0.0
2,445,857	-		PGA1_c23490	0.76	+0.5
2,445,870	+		PGA1_c23490	0.77	-0.6
2,445,876	+		PGA1_c23490	0.77	+1.6
2,445,884	-		PGA1_c23490	0.77	-1.3
2,445,902	-		PGA1_c23490	0.78	-0.9
2,445,902	-		PGA1_c23490	0.78	+0.4
2,445,927	+		PGA1_c23490	0.79	+1.2
2,445,945	+		PGA1_c23490	0.80	+1.4
2,445,946	+		PGA1_c23490	0.80	+0.8
2,445,954	-		PGA1_c23490	0.80	-0.4
2,445,954	-		PGA1_c23490	0.80	+0.9
2,446,101	+		PGA1_c23490	0.87	-0.5
2,446,133	+		PGA1_c23490	0.88	-0.3
2,446,144	+		PGA1_c23490	0.89	+0.4
2,446,151	-		PGA1_c23490	0.89	+0.6
2,446,162	+		PGA1_c23490	0.89	+0.7
2,446,164	+		PGA1_c23490	0.90	+0.8
2,446,170	-		PGA1_c23490	0.90	+1.1
2,446,183	-				+0.7
2,446,183	-				+0.1
2,446,209	+				-1.1
2,446,214	+				+0.9
2,446,217	-				-0.0
2,446,217	-				+1.1
2,446,217	-				-1.1
2,446,217	-				+0.6
2,446,217	-				+0.1
2,446,217	-				+1.5
2,446,217	-				-2.6
2,446,245	+				+0.9
2,446,245	-				+0.2
2,446,256	+				+1.6
2,446,266	+				+2.0
2,446,276	-				+0.8
2,446,333	+				+0.2
2,446,333	+				-0.3
2,446,448	-				+0.9
2,446,514	-				+0.3
2,446,514	-				-2.2
2,446,514	-				+1.6
2,446,522	-				+0.3
2,446,591	-				+1.1
2,446,657	+				-1.3
2,446,676	-				-0.8
2,446,683	+				-0.0
2,446,688	+				-0.3
2,446,778	+				+0.7
2,446,798	+				-1.6
2,446,798	+				+0.8
2,446,858	+				+0.4
2,446,866	-				+0.2
2,446,934	-				-1.8
2,446,969	+				-1.9
2,446,980	+				-0.3
2,446,988	-				-0.5
2,446,988	-				+1.3
2,446,988	-				-0.8
2,446,988	-				+0.4
2,446,988	-				+0.0
2,446,988	-				+0.6
2,446,988	-				-0.3
2,446,988	-				+0.5
2,447,077	+				+0.1
2,447,085	-				+0.7
2,447,136	-				-2.1
2,447,166	+				-2.1
2,447,189	-				-2.1
2,447,331	+		PGA1_c23500	0.11	-0.3
2,447,370	+		PGA1_c23500	0.13	-2.1
2,447,378	-		PGA1_c23500	0.13	-1.4