Experiment: MoLS4 with Spermidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0069 and DVUA0070 are separated by 62 nucleotides DVUA0070 and DVUA0071 are separated by 92 nucleotides
DVUA0069: DVUA0069 - GtrA family protein, selenocysteine-containing (TIGR), at 90,871 to 92,028
DVUA0069
DVUA0070: DVUA0070 - conserved domain protein (TIGR), at 92,091 to 94,022
DVUA0070
DVUA0071: DVUA0071 - glycosyl transferase, group 1/2 family protein (TIGR), at 94,115 to 96,271
DVUA0071
Position (kb)
92
93
94
95 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 91.112 kb on - strand, within DVUA0069 at 91.231 kb on - strand, within DVUA0069 at 91.231 kb on - strand, within DVUA0069 at 91.275 kb on + strand, within DVUA0069 at 91.323 kb on - strand, within DVUA0069 at 91.345 kb on - strand, within DVUA0069 at 91.364 kb on + strand, within DVUA0069 at 91.400 kb on - strand, within DVUA0069 at 91.475 kb on + strand, within DVUA0069 at 91.525 kb on - strand, within DVUA0069 at 91.590 kb on - strand, within DVUA0069 at 91.615 kb on + strand, within DVUA0069 at 91.741 kb on + strand, within DVUA0069 at 91.778 kb on + strand, within DVUA0069 at 91.831 kb on - strand, within DVUA0069 at 91.860 kb on - strand, within DVUA0069 at 91.910 kb on + strand, within DVUA0069 at 91.925 kb on + strand at 91.938 kb on - strand at 92.058 kb on + strand at 92.344 kb on - strand, within DVUA0070 at 92.854 kb on + strand, within DVUA0070 at 92.911 kb on + strand, within DVUA0070 at 92.941 kb on + strand, within DVUA0070 at 94.017 kb on + strand at 94.160 kb on + strand at 94.231 kb on + strand at 94.252 kb on + strand at 94.383 kb on + strand, within DVUA0071 at 94.678 kb on + strand, within DVUA0071 at 94.714 kb on + strand, within DVUA0071 at 94.979 kb on - strand, within DVUA0071
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Spermidine (N) remove 91,112 - DVUA0069 0.21 -0.2 91,231 - DVUA0069 0.31 +0.3 91,231 - DVUA0069 0.31 -0.4 91,275 + DVUA0069 0.35 +0.1 91,323 - DVUA0069 0.39 -0.3 91,345 - DVUA0069 0.41 -1.0 91,364 + DVUA0069 0.43 -0.1 91,400 - DVUA0069 0.46 +0.1 91,475 + DVUA0069 0.52 -0.5 91,525 - DVUA0069 0.56 +0.2 91,590 - DVUA0069 0.62 +0.3 91,615 + DVUA0069 0.64 -0.2 91,741 + DVUA0069 0.75 -0.6 91,778 + DVUA0069 0.78 -0.3 91,831 - DVUA0069 0.83 +0.8 91,860 - DVUA0069 0.85 +0.3 91,910 + DVUA0069 0.90 -0.7 91,925 + -0.5 91,938 - +0.5 92,058 + +0.0 92,344 - DVUA0070 0.13 -1.1 92,854 + DVUA0070 0.39 -1.3 92,911 + DVUA0070 0.42 -1.0 92,941 + DVUA0070 0.44 -4.6 94,017 + -2.3 94,160 + -1.1 94,231 + -3.2 94,252 + -2.4 94,383 + DVUA0071 0.12 -3.4 94,678 + DVUA0071 0.26 -2.4 94,714 + DVUA0071 0.28 -1.1 94,979 - DVUA0071 0.40 -2.7
Or see this region's nucleotide sequence