Experiment: MoLS4 with Spermidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0629 and DVU0630 are separated by 3 nucleotides DVU0630 and DVU0631 are separated by 187 nucleotides DVU0631 and DVU0632 are separated by 246 nucleotides DVU0632 and DVU0633 overlap by 1 nucleotides
DVU0629: DVU0629 - transcriptional regulator, TetR family (TIGR), at 696,323 to 696,883
DVU0629
DVU0630: DVU0630 - hypothetical protein (TIGR), at 696,887 to 697,063
DVU0630
DVU0631: DVU0631 - conserved hypothetical protein (TIGR), at 697,251 to 698,816
DVU0631
DVU0632: DVU0632 - cupin family protein (TIGR), at 699,063 to 699,680
DVU0632
DVU0633: DVU0633 - penicillin-binding protein (TIGR), at 699,680 to 702,103
DVU0633
Position (kb) 697
698
699 Strain fitness (log2 ratio) -2
-1
0
1 at 696.256 kb on - strand at 696.280 kb on + strand at 696.445 kb on - strand, within DVU0629 at 696.451 kb on + strand, within DVU0629 at 696.459 kb on - strand, within DVU0629 at 696.462 kb on + strand, within DVU0629 at 696.633 kb on - strand, within DVU0629 at 696.649 kb on - strand, within DVU0629 at 696.716 kb on - strand, within DVU0629 at 696.863 kb on - strand at 696.916 kb on + strand, within DVU0630 at 696.919 kb on - strand, within DVU0630 at 697.012 kb on - strand, within DVU0630 at 697.182 kb on + strand at 697.182 kb on + strand at 697.182 kb on + strand at 697.182 kb on + strand at 697.197 kb on + strand at 697.236 kb on - strand at 697.347 kb on + strand at 697.430 kb on + strand, within DVU0631 at 697.549 kb on + strand, within DVU0631 at 697.581 kb on + strand, within DVU0631 at 697.777 kb on - strand, within DVU0631 at 697.811 kb on + strand, within DVU0631 at 697.821 kb on + strand, within DVU0631 at 697.926 kb on + strand, within DVU0631 at 697.929 kb on + strand, within DVU0631 at 697.932 kb on - strand, within DVU0631 at 697.937 kb on - strand, within DVU0631 at 697.966 kb on - strand, within DVU0631 at 698.080 kb on - strand, within DVU0631 at 698.185 kb on - strand, within DVU0631 at 698.217 kb on + strand, within DVU0631 at 698.332 kb on + strand, within DVU0631 at 698.353 kb on + strand, within DVU0631 at 698.391 kb on + strand, within DVU0631 at 698.399 kb on - strand, within DVU0631 at 698.441 kb on + strand, within DVU0631 at 698.454 kb on - strand, within DVU0631 at 698.508 kb on + strand, within DVU0631 at 698.573 kb on + strand, within DVU0631 at 698.618 kb on + strand, within DVU0631 at 698.626 kb on - strand, within DVU0631 at 698.672 kb on + strand at 698.676 kb on + strand at 698.680 kb on - strand at 698.693 kb on + strand at 698.824 kb on + strand at 698.886 kb on - strand at 698.890 kb on + strand at 698.995 kb on + strand at 699.005 kb on + strand at 699.008 kb on - strand at 699.008 kb on - strand at 699.120 kb on + strand at 699.150 kb on + strand, within DVU0632 at 699.171 kb on + strand, within DVU0632 at 699.179 kb on - strand, within DVU0632 at 699.196 kb on + strand, within DVU0632 at 699.221 kb on - strand, within DVU0632 at 699.264 kb on + strand, within DVU0632 at 699.269 kb on + strand, within DVU0632 at 699.274 kb on + strand, within DVU0632 at 699.274 kb on + strand, within DVU0632 at 699.311 kb on - strand, within DVU0632 at 699.351 kb on + strand, within DVU0632 at 699.359 kb on - strand, within DVU0632 at 699.551 kb on + strand, within DVU0632 at 699.652 kb on + strand at 699.652 kb on + strand at 699.681 kb on + strand at 699.708 kb on - strand at 699.708 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Spermidine (N) remove 696,256 - -0.8 696,280 + -1.8 696,445 - DVU0629 0.22 -0.4 696,451 + DVU0629 0.23 -0.0 696,459 - DVU0629 0.24 -0.7 696,462 + DVU0629 0.25 -1.4 696,633 - DVU0629 0.55 -0.2 696,649 - DVU0629 0.58 -0.1 696,716 - DVU0629 0.70 -0.8 696,863 - -0.4 696,916 + DVU0630 0.16 -0.0 696,919 - DVU0630 0.18 -0.3 697,012 - DVU0630 0.71 +0.1 697,182 + -0.3 697,182 + -1.6 697,182 + +0.1 697,182 + +0.0 697,197 + +0.3 697,236 - -0.1 697,347 + +0.5 697,430 + DVU0631 0.11 -1.8 697,549 + DVU0631 0.19 -1.3 697,581 + DVU0631 0.21 -1.7 697,777 - DVU0631 0.34 +0.1 697,811 + DVU0631 0.36 -0.3 697,821 + DVU0631 0.36 +0.6 697,926 + DVU0631 0.43 +0.2 697,929 + DVU0631 0.43 -0.3 697,932 - DVU0631 0.43 +0.3 697,937 - DVU0631 0.44 +0.3 697,966 - DVU0631 0.46 -0.7 698,080 - DVU0631 0.53 -0.3 698,185 - DVU0631 0.60 +0.1 698,217 + DVU0631 0.62 +0.2 698,332 + DVU0631 0.69 -0.6 698,353 + DVU0631 0.70 -0.4 698,391 + DVU0631 0.73 +1.6 698,399 - DVU0631 0.73 +0.1 698,441 + DVU0631 0.76 +0.2 698,454 - DVU0631 0.77 +0.2 698,508 + DVU0631 0.80 +0.1 698,573 + DVU0631 0.84 +0.4 698,618 + DVU0631 0.87 +0.0 698,626 - DVU0631 0.88 -1.4 698,672 + +0.1 698,676 + +0.0 698,680 - -1.0 698,693 + +0.2 698,824 + +0.0 698,886 - +0.0 698,890 + +0.5 698,995 + -0.4 699,005 + +0.5 699,008 - -0.0 699,008 - -0.1 699,120 + +0.2 699,150 + DVU0632 0.14 +0.0 699,171 + DVU0632 0.17 -0.1 699,179 - DVU0632 0.19 -0.5 699,196 + DVU0632 0.22 -0.0 699,221 - DVU0632 0.26 +0.3 699,264 + DVU0632 0.33 +0.1 699,269 + DVU0632 0.33 +0.3 699,274 + DVU0632 0.34 -0.6 699,274 + DVU0632 0.34 +0.4 699,311 - DVU0632 0.40 -0.7 699,351 + DVU0632 0.47 -0.4 699,359 - DVU0632 0.48 +0.0 699,551 + DVU0632 0.79 +0.1 699,652 + -0.1 699,652 + +0.4 699,681 + -0.2 699,708 - +1.6 699,708 - -0.8
Or see this region's nucleotide sequence