Experiment: MoLS4 with Spermidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0462 and aroA overlap by 1 nucleotides aroA and DVU0464 are separated by 5 nucleotides DVU0464 and trpE are separated by 131 nucleotides
DVU0462: DVU0462 - chorismate mutase/prephenate dehydratase (TIGR), at 529,454 to 530,629
DVU0462
DVU0463: aroA - 3-phosphoshikimate 1-carboxyvinyltransferase (TIGR), at 530,629 to 531,948
aroA
DVU0464: DVU0464 - prephenate and/or arogenate dehydrogenase <small>(from data)</small>, at 531,954 to 532,721
DVU0464
DVU0465: trpE - anthranilate synthase, component I (TIGR), at 532,853 to 534,451
trpE
Position (kb) 530
531
532 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 529.657 kb on - strand, within DVU0462 at 529.699 kb on + strand, within DVU0462 at 529.768 kb on + strand, within DVU0462 at 529.861 kb on + strand, within DVU0462 at 529.861 kb on + strand, within DVU0462 at 529.869 kb on - strand, within DVU0462 at 529.926 kb on + strand, within DVU0462 at 529.941 kb on + strand, within DVU0462 at 529.941 kb on + strand, within DVU0462 at 530.011 kb on + strand, within DVU0462 at 530.038 kb on + strand, within DVU0462 at 530.038 kb on + strand, within DVU0462 at 530.092 kb on - strand, within DVU0462 at 530.212 kb on - strand, within DVU0462 at 530.356 kb on + strand, within DVU0462 at 530.356 kb on + strand, within DVU0462 at 530.356 kb on + strand, within DVU0462 at 530.364 kb on - strand, within DVU0462 at 530.404 kb on + strand, within DVU0462 at 530.426 kb on + strand, within DVU0462 at 530.440 kb on - strand, within DVU0462 at 530.514 kb on - strand at 530.518 kb on + strand at 530.526 kb on - strand at 530.561 kb on + strand at 530.585 kb on + strand at 530.620 kb on - strand at 530.620 kb on - strand at 531.925 kb on + strand at 531.986 kb on + strand at 532.039 kb on + strand, within DVU0464 at 532.087 kb on + strand, within DVU0464 at 532.260 kb on - strand, within DVU0464 at 532.347 kb on + strand, within DVU0464 at 532.436 kb on - strand, within DVU0464 at 532.436 kb on - strand, within DVU0464 at 532.552 kb on + strand, within DVU0464 at 532.557 kb on + strand, within DVU0464 at 532.678 kb on + strand at 532.692 kb on + strand at 532.700 kb on - strand at 532.722 kb on - strand at 532.737 kb on + strand at 532.844 kb on + strand at 532.917 kb on - strand at 532.938 kb on + strand at 532.948 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Spermidine (N) remove 529,657 - DVU0462 0.17 -4.3 529,699 + DVU0462 0.21 -4.7 529,768 + DVU0462 0.27 -5.7 529,861 + DVU0462 0.35 -5.3 529,861 + DVU0462 0.35 -4.3 529,869 - DVU0462 0.35 -3.1 529,926 + DVU0462 0.40 -5.4 529,941 + DVU0462 0.41 -4.2 529,941 + DVU0462 0.41 -4.8 530,011 + DVU0462 0.47 -0.8 530,038 + DVU0462 0.50 -3.7 530,038 + DVU0462 0.50 -4.4 530,092 - DVU0462 0.54 -5.6 530,212 - DVU0462 0.64 -5.0 530,356 + DVU0462 0.77 -5.2 530,356 + DVU0462 0.77 -5.2 530,356 + DVU0462 0.77 -4.5 530,364 - DVU0462 0.77 -2.8 530,404 + DVU0462 0.81 -5.3 530,426 + DVU0462 0.83 -3.6 530,440 - DVU0462 0.84 -4.7 530,514 - -3.3 530,518 + -3.7 530,526 - -1.3 530,561 + -0.8 530,585 + -0.1 530,620 - -0.3 530,620 - -2.7 531,925 + -3.2 531,986 + -2.4 532,039 + DVU0464 0.11 -3.7 532,087 + DVU0464 0.17 -4.3 532,260 - DVU0464 0.40 -5.8 532,347 + DVU0464 0.51 -3.4 532,436 - DVU0464 0.63 -1.9 532,436 - DVU0464 0.63 -3.7 532,552 + DVU0464 0.78 -5.3 532,557 + DVU0464 0.79 -3.1 532,678 + -0.8 532,692 + -1.7 532,700 - -0.3 532,722 - -5.2 532,737 + -3.0 532,844 + +1.0 532,917 - -5.3 532,938 + -2.5 532,948 + -2.0
Or see this region's nucleotide sequence